MXO02264.3prime Sequence
644 bp (642 high quality bases) assembled on 2007-01-19
> MXO02264.3prime
ATGGTCTAGAAAGCTTGCACAGTCGGTAGAAGGAGTGGCCTGATCTTGTG
CGTTATTTTTGTTTGTTACATTGCTTTGCAAAATGTGACTTTCCTTTTCT
TGTTTGGTGTCATCAGTCTCAGTTTTCGACTTGGGTAGGTTCTTTCGCTC
TTGTTCATCATTGTTAACATTCTCCTCGTCCTCATCATCGTCATAGTTGG
TTGGTTCCTCGCCCTTGCGCAATAGCTTACCAACCAGCTCATATTTTTCC
TTAAACTGCATTTCCCATTCCCGCACAGAGTCCATTTCCACGGCACTTAA
ATCGCTCAGGTCATCGTATTCATCCTTGTCAATTGAAACCACGCTGAAAG
TGGCCAAGTTTCGCGAGGCATCTCTACCCGCAAAAGTTGCGTAGGGTCCA
CCTGGGCCGTAAAAACGCCTTCCTTTGCTGACATCGTAAACACTTCCGTT
GACGGCGACCAAAACACGGCCATCCGGCTGAGTTCCATCGTACTGGCGAA
GCTCCTTCACGGTAAAATCGCGTCGGATTTTGGGTAACTCAGGTTCGGAT
GGCTTTGCAACGCCCACGGATGGCACTTCGGTGCGATCCCGAACGATTTT
ATAGACCAGGAAGCAGATGATGGCCAGGAGGGCCAGGTTCATTG
MXO02264.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:39:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9066-PA | 747 | CG9066-RA | 119..744 | 644..19 | 3130 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MSBP-RC | 1503 | CG9066-RC | 406..1031 | 644..19 | 3130 | 100 | Minus |
MSBP-RB | 1420 | CG9066-RB | 323..948 | 644..19 | 3130 | 100 | Minus |
MSBP-RA | 1487 | CG9066-RA | 390..1015 | 644..19 | 3130 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15889299..15889544 | 399..644 | 1230 | 100 | Plus |
X | 23542271 | X | 15888039..15888269 | 19..249 | 1155 | 100 | Plus |
X | 23542271 | X | 15888344..15888499 | 249..404 | 780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:25:10 has no hits.
MXO02264.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:54 Download gff for
MXO02264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9066-PA | 119..747 | 18..644 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:33 Download gff for
MXO02264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MSBP-RA | 390..1019 | 13..644 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:27 Download gff for
MXO02264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MSBP-RA | 390..1019 | 13..644 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:27 Download gff for
MXO02264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15888344..15888496 | 249..401 | 100 | <- | Plus |
X | 15889302..15889544 | 402..644 | 100 | | Plus |
X | 15888035..15888268 | 13..248 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:33 Download gff for
MXO02264.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15782377..15782529 | 249..401 | 100 | <- | Plus |
arm_X | 15783335..15783577 | 402..644 | 100 | | Plus |
arm_X | 15782068..15782301 | 13..248 | 98 | <- | Plus |
MXO02264.5prime Sequence
557 bp (521 high quality bases) assembled on 2007-01-19
> MXO02264.5prime
CAGTCGACATGGATTCCAAAGTGGGTGCAGATCCTAGTTCGGCCTACGAC
AAGGAAATCGGCAACAATCTAAACAACGATGATTCCTCATTTCTGGGCAA
CATAATCCGCGAAATCCTGTACAGTCCAATGAACCTGGCCCTCCTGGCCA
TCATCTGCTTCCTGGTCTATAAAATCGTTCGGGATCGCACCGAAGTGCCA
TCCGTGGGCGTTGCAAAGCCATCCGAACCTGAGTTACCCAAAATCCGACG
CGATTTTACCGTGAAGGAGCTTCGCCAGTACGATGGAACTCAGCCGGATG
GCCGTGTTTTGGTCGCCGTCAACGGAAGTGTTTACGATGTCAGCAAAGGA
AGGCGTTTTTACGGCCCAGGTGGACCCTACGCAACTTTTGCGGGCAGAGA
TGCCTCGCGAAACTTGGCCACTTTCAACGTGGTTTCAATTGACAAGGATG
AATACGATGACCTGAGCGATTTAAGTGCCGTGGAAATGGACTCTGTGCGG
GAATGGGAAATGCAGTTTAAGGACAAATATGAGCTGGTTGGTAAGCTATT
GCGCAAG
MXO02264.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:39:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9066-PA | 747 | CG9066-RA | 1..549 | 9..557 | 2670 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MSBP-RC | 1503 | CG9066-RC | 288..836 | 9..557 | 2700 | 99.5 | Plus |
MSBP-RB | 1420 | CG9066-RB | 205..753 | 9..557 | 2700 | 99.5 | Plus |
MSBP-RA | 1487 | CG9066-RA | 272..820 | 9..557 | 2700 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 15889299..15889662 | 372..9 | 1820 | 100 | Minus |
X | 23542271 | X | 15888344..15888499 | 522..367 | 750 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:34:23 has no hits.
MXO02264.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:54 Download gff for
MXO02264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9066-PA | 1..549 | 9..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:29:08 Download gff for
MXO02264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MSBP-RA | 272..820 | 9..557 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:17:30 Download gff for
MXO02264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MSBP-RA | 272..820 | 9..557 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:30 Download gff for
MXO02264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 15888234..15888268 | 523..557 | 97 | <- | Minus |
X | 15888344..15888496 | 370..522 | 98 | <- | Minus |
X | 15889302..15889662 | 9..369 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:29:08 Download gff for
MXO02264.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 15782267..15782301 | 523..557 | 97 | <- | Minus |
arm_X | 15782377..15782529 | 370..522 | 98 | <- | Minus |
arm_X | 15783335..15783695 | 9..369 | 100 | | Minus |