MXO02265.3prime Sequence
445 bp (341 high quality bases) assembled on 2007-01-19
> MXO02265.3prime
ATGGTCTAGAAAGCTTGCTGGTTTCGCATTCTTCTCCTCAGAGAAATCCA
AATCCTCTTTAATTGCCTTCGATCGTCGCTTTTCGTTTGACGTTAGCAAT
TGTGAGAGCTTCGTTTGTTTAGCTAGATCGTAGGCTTCTTTTTTACTCCG
CATTGCACAGTCTTCCAGGGTTTCGGCCGCTTCAAACATGCCTTGACGTC
GGTAAAGTGCTCCCAGATTTTTTAGAGTGGTTGTGACCGTGGGCGAATCC
ACTTTAGCGGCCTTATGCCAACCGCCGTACTCGCCATATGGAGTGTTCTC
CCTGTTATCGAATTTGTGCTCCTCACGCTCCTCAGCCACCTGCCAAATGG
GCTTGTTTTTGCTGTCGATGGCTCCAAACTCACGTTCGTGGGCTCGCGTC
AAGACCTGCTTATAGAGGATTTCAGCTTCGGTGTATCTACCTTGC
MXO02265.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:39:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5433-PA | 1527 | Klc-RA | 1098..1524 | 445..19 | 2135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Klc-RB | 1841 | CG5433-RB | 1215..1641 | 445..19 | 2135 | 100 | Minus |
Klc-RA | 1843 | CG5433-RA | 1217..1643 | 445..19 | 2135 | 100 | Minus |
Klc-RC | 1876 | CG5433-RC | 1253..1676 | 445..19 | 2080 | 99.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12746898..12747206 | 34..342 | 1545 | 100 | Plus |
3L | 28110227 | 3L | 12747273..12747380 | 338..445 | 540 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:46:13 has no hits.
MXO02265.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:55 Download gff for
MXO02265.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5433-PA | 1098..1527 | 15..445 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:27 Download gff for
MXO02265.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klc-RA | 1217..1646 | 15..445 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:08 Download gff for
MXO02265.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klc-RA | 1217..1646 | 15..445 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:08 Download gff for
MXO02265.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12747275..12747380 | 340..445 | 100 | | Plus |
3L | 12746898..12747203 | 34..339 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:27 Download gff for
MXO02265.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12740375..12740480 | 340..445 | 100 | | Plus |
arm_3L | 12739998..12740303 | 34..339 | 100 | <- | Plus |
MXO02265.5prime Sequence
839 bp (813 high quality bases) assembled on 2007-01-19
> MXO02265.5prime
CAGTCGACATGACGCAAATGTCGCAGGACGAAATCATAACCAATACGAAA
ACAGTCCTTCAAGGCCTCGAAGCCTTGCGAGTGGAGCATGTTTCGATTAT
GAACGGAATCGCCGAGGTGCAGAAGGACAATGAAAAGTCGGACATGCTGC
GAAAGAACATCGAGAACATCGAACTGGGCCTCAGCGAGGCCCAGGTGATG
ATGGCCCTGACATCCCATCTGCAGAACATCGAGGCCGAGAAGCACAAGCT
TAAGACACAGGTGCGCCGCCTCCACCAGGAGAACGCCTGGCTTCGCGACG
AGCTGGCCAACACTCAGCAAAAGTTCCAGGCATCCGAGCAGCTGGTGGCC
CAACTAGAGGAGGAGAAGAAGCACCTGGAGTTCATGGCGTCCGTGAAGAA
GTACGACGAGAATCAGGAGCAGGACGACGCTTGCGACAAGTCCCGCACCG
ATCCCGTGGTCGAGCTATTCCCGGACGAGGAAAACGAGGACAGACACAAC
ATGTCGCCCACTCCGCCCAGCCAGTTCGCCAACCAGACTTCCGGCTACGA
GATTCCAGCGCGTCTCCGTACTCTGCACAACCTGGTCATTCAGTATGCAT
CGCAGGGAAGATACGAGGTAGCCGTTCCCCTCTGCAAGCAAGCATTGGAA
GATCTCGAAAGGACAAGTGGTCACGACCATCCCGATGTAGCAACCATGCT
GAACATTTTGGCTCTCGTGTACCGCGATCAGAACAAGTATAAGGAGGCCG
CCAATTTACTCAACGACGCTCTGTCGATTCGAGGAAAGACACTGGGCGAG
AACCATCCAGCCGTGGCGGCCACGTTGAACACTTGGCCG
MXO02265.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:39:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5433-PA | 1527 | Klc-RA | 1..832 | 9..839 | 4120 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Klc-RC | 1876 | CG5433-RC | 156..987 | 9..839 | 4135 | 99.9 | Plus |
Klc-RB | 1841 | CG5433-RB | 118..949 | 9..839 | 4135 | 99.9 | Plus |
Klc-RA | 1843 | CG5433-RA | 120..951 | 9..839 | 4135 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12748056..12748657 | 610..9 | 3010 | 100 | Minus |
3L | 28110227 | 3L | 12747821..12747943 | 731..609 | 615 | 100 | Minus |
3L | 28110227 | 3L | 12747655..12747757 | 831..729 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:34:29 has no hits.
MXO02265.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:55 Download gff for
MXO02265.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5433-PA | 1..832 | 9..839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:29:12 Download gff for
MXO02265.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klc-RA | 113..951 | 1..839 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:17:33 Download gff for
MXO02265.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Klc-RA | 113..951 | 1..839 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:33 Download gff for
MXO02265.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12747821..12747941 | 611..731 | 100 | <- | Minus |
3L | 12747646..12747754 | 732..839 | 99 | <- | Minus |
3L | 12748056..12748664 | 1..610 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:29:12 Download gff for
MXO02265.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12740746..12740854 | 732..839 | 99 | <- | Minus |
arm_3L | 12740921..12741041 | 611..731 | 100 | <- | Minus |
arm_3L | 12741156..12741764 | 1..610 | 99 | | Minus |