MXO02267.3prime Sequence
335 bp (312 high quality bases) assembled on 2007-01-19
> MXO02267.3prime
AAAAAAGAATGGTNTAGAAAGCTTGCTCCCAGTTTTCGGCGCCGCGGCAG
CTGCAGCGGCAAGGCAACAACGGAAGCAGACGAGGGCGGATTTGCTGCCA
TCACCCGAAGGGCAAGAGCCACTGGAGCTGCGAGTCCGCCGCCGACGTAC
TGCAGATGCTGCACCACCGAGAGCTGTGGCTGCTGCTGCTTGAGCAGCTT
GGCGGCAGCGTGTGCCTCCGCCGCAGCCACCACGACGGGGTGCACCGGTT
CGGTGCCGACTCCTCCGTTGACATGTGGACCGGAGCTTTCGCAATCGTCT
TCGTCTGAGATCAGCGAAATGCTGAGGTCGCTGGA
MXO02267.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:39:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3771-PA | 1230 | a6-RA | 919..1227 | 335..27 | 1420 | 98.3 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| a6-RC | 2047 | CG3771-RC | 1271..1579 | 335..27 | 1470 | 98.4 | Minus |
| a6-RB | 2218 | CG3771-RB | 1279..1587 | 335..27 | 1470 | 98.4 | Minus |
| a6-RA | 2210 | CG3771-RA | 1271..1579 | 335..27 | 1470 | 98.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1694246..1694554 | 27..335 | 1470 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:16:04 has no hits.
MXO02267.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:56 Download gff for
MXO02267.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3771-PA | 920..1230 | 24..334 | 97 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:17 Download gff for
MXO02267.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| a6-RA | 1272..1585 | 20..334 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:47 Download gff for
MXO02267.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| a6-RA | 1272..1585 | 20..334 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:47 Download gff for
MXO02267.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1694240..1694553 | 20..334 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:17 Download gff for
MXO02267.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1588273..1588586 | 20..334 | 97 | | Plus |
