MXO02275.5prime Sequence
625 bp (273 high quality bases) assembled on 2007-01-19
> MXO02275.5prime
CAATCGACATGGCCGGCTTCGTCGCCCTGTACACGGGGGCTGGGAACTGC
ATCGACTAGACTAAGTACCAGCGGGTGATTAAGGAGGCCTGCCTGCGCGC
CTCTGAGATCCTTCGCAACGGCGGATCCGCCGTCGATGCCTGCGAGGCGG
CCATTGTGCGGCTGGAGAACTGCGGCTACTCAAACGCCGGCTATGGCTCC
AATCTCTGCATGGACGGCTCTGTGCAGTGCGATGCAGCTATAATGGATGG
CTCAACGCTTAACTTTGGCGCCTGCACGAACGTTAGTCGGGTGAAGAACC
CCATACAGTTGGCGAGACGCATCTGCGATGCCCAGTCCAGTCCGCAGCTT
CTGGAGCGCATTCCACCGATGATCCTCGCCGGCACTGGAGCGGAACACTA
TGCCGACGAGGTGGGTTGCTCCATGGTGGAGCCCGGCGTACTGATCTCAT
CTAAGGCCAAGTTCCAGTTTAATCACTACTAAAGCAAGTACGACCTCATG
GTCAACAGCAGATTGGGCAAGGCTACGTCCAAGGAATCCGTACAAGTGCC
GGAACCAGGAAACGAGGTGGAACTTGCCGCTGCTTTGGACACAGTGGGAG
CGGTATGTGTTGATGGGGCACGTAA
MXO02275.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:40:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5241-PA | 1098 | CG5241-RA | 1..612 | 9..620 | 2735 | 97.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:29:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taspase1-RB | 2159 | CG5241-RB | 84..697 | 7..620 | 2875 | 97.9 | Plus |
| Taspase1-RA | 1503 | CG5241-RA | 84..697 | 7..620 | 2875 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:29:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16086753..16087337 | 620..36 | 2775 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:29:38 has no hits.
MXO02275.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:57 Download gff for
MXO02275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5241-PA | 1..613 | 9..623 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:55 Download gff for
MXO02275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taspase1-RA | 76..702 | 1..625 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:36 Download gff for
MXO02275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taspase1-RA | 76..702 | 1..625 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:36 Download gff for
MXO02275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16086748..16087336 | 37..625 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:55 Download gff for
MXO02275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16079848..16080436 | 37..625 | 97 | <- | Minus |
