MXO02281.3prime Sequence
802 bp (778 high quality bases) assembled on 2007-01-19
> MXO02281.3prime
ATGGTCTAGAAAGCTTGCAACCGGCGAATCATATTTACAGGTCATGGTTG
CCTCGATGTCCTCCACCGTTCGCGGCACAATCGCAAAGTTCTCCACGCCA
GTCTTCGTGATGAGCACATCGTCCTCGATGCGCACACCTCCGAAATTCCG
GAAGCGATTGAACATCTCTGCGTTAATGAATTTAGCAATGTTCGGATCGG
CCAGAGCGCGGTCCATCAGCCAGTTGATGAAGTAGCAGCCGGGTTCGATT
GTGACATACATGCCGGCCTTAAGGATGCGGGCAAAGCGCAGCTTGCTCAG
CCACGGTTCACTGGGGCGCTTGGGCTCCTTGGGCAGATAGCCGCCCACGT
CGTGCACATCCAGACCGATCAAGTGGCCCAGGCCATGTGGCTGGAACACG
CCCGAAACACCTGCCTCGAGCATCTCCTCCACATCGCCCTTGAGCATGCC
GCCCTCCTTCAGGCGCTGCAGCAACACCCTGCCCGCCAGCTTGTGCATGT
CCACCCAGGAGACTCCGTCACGGGCTGACTCTGTGACCGCATTGCGGGCA
TCCAGCACGGCATTGTAGATGAACTTCTGGTCGTCGGTGAACTTTCCATT
GGCCGGGAATGTGCAGGTTATGTCGGCCGCATAGCCACAATAGTTGGCTC
CCATATCGAACAGGCAGAGATCACCATCCTGGACGGGCTTGCTGTTGGGT
GCGCCCGCGTGTCCATAGTGCAAGATCGACGAGTTCGTTCCGCTGCCGCA
TATGCAGGTGTAGGAGGCATGCCGGCAGCCGCCCACGGAGTAGGCGTGGT
GC
MXO02281.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:41:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5663-PA | 1476 | Dip-C-RA | 690..1473 | 802..19 | 3920 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:51:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip-C-RB | 1951 | CG5663-RB | 1066..1849 | 802..19 | 3920 | 100 | Minus |
| Dip-C-RA | 1747 | CG5663-RA | 862..1645 | 802..19 | 3920 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:51:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12411911..12412694 | 19..802 | 3920 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:51:29 has no hits.
MXO02281.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:59 Download gff for
MXO02281.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5663-PA | 690..1476 | 18..802 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:25 Download gff for
MXO02281.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 846..1643 | 4..802 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:11 Download gff for
MXO02281.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 862..1659 | 4..802 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:11 Download gff for
MXO02281.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12411897..12412694 | 4..802 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:25 Download gff for
MXO02281.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8237619..8238416 | 4..802 | 99 | | Plus |
MXO02281.5prime Sequence
330 bp (316 high quality bases) assembled on 2007-01-19
> MXO02281.5prime
AAATTATCATCAACATGGCGCTTTCGATGGATCGGGTACGCATGCCATGA
CCCTCTTCCGGACACAGGGACGTGCTGGCAAGGCCATCCTTAAGGACCTG
CTGCCGGGCCTCAAGTTCAACGACGGCAACCTGCTGGTGCTCCTCGAGGG
CGGCAAGGACCAGAGCCTGTACAACACCGACGTGGACTACGTTTTCCGGC
AGGAGTCCTATTTCCAGTACTTGTTCGGTGTCAAGGAGCCGGGCTGCTAC
GGCATCCTAACCATTGATGTGAAAACTGGTGCACAGAAAAGTGTTCTCTT
TGTTCCTCGCTTTCCCGATGAGTACGGCAC
MXO02281.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:41:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5663-PA | 1476 | Dip-C-RA | 38..326 | 45..330 | 1300 | 98.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dip-C-RB | 1951 | CG5663-RB | 395..702 | 29..330 | 1375 | 97.7 | Plus |
| Dip-C-RA | 1747 | CG5663-RA | 191..498 | 29..330 | 1375 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12413058..12413346 | 330..45 | 1300 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:31:12 has no hits.
MXO02281.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:18:59 Download gff for
MXO02281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5663-PA | 9..326 | 21..330 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:26 Download gff for
MXO02281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 165..482 | 21..330 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:13 Download gff for
MXO02281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dip-C-RA | 181..498 | 21..330 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:13 Download gff for
MXO02281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12413058..12413353 | 39..330 | 97 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:26 Download gff for
MXO02281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8238780..8239075 | 39..330 | 97 | -> | Minus |
