MXO02282.3prime Sequence
292 bp (238 high quality bases) assembled on 2007-01-19
> MXO02282.3prime
ATGGTCTAGAAAGCTTGCATTTCTTCGCAATCCAAAGGTGGGCAACTGAT
GGGCACAACAGCAGGCCACCACGTACAAGATGCCAAAAAAGAAGTTCAGC
TTGGCTGTTTGCCGAGGCACCAGATGCATCGTCTGTTCGTTGCGGAAACG
TTTCTCAATCTGGAACGCTTGCGGCAGGGTTACCAGCGGCAGCAGGAACC
ACAGAGAGTACTTCAAACCGAAGATGAAGAACAATGAGTAGGGTGCAAAG
AGCAGCATGGCATACAGAACGTGCGATGCTGTACGGCCTATC
MXO02282.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:41:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5876-PA | 1080 | heix-RA | 804..1077 | 292..19 | 1370 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| heix-RA | 3130 | CG5876-RA | 1350..1623 | 292..19 | 1370 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16297558..16297831 | 19..292 | 1370 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:31:23 has no hits.
MXO02282.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:00 Download gff for
MXO02282.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5876-PA | 804..1080 | 16..292 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:32 Download gff for
MXO02282.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| heix-RA | 1350..1623 | 19..292 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:19 Download gff for
MXO02282.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| heix-RA | 1350..1623 | 19..292 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:19 Download gff for
MXO02282.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16297558..16297831 | 19..292 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:32 Download gff for
MXO02282.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16297558..16297831 | 19..292 | 100 | | Plus |
MXO02282.5prime Sequence
888 bp (768 high quality bases) assembled on 2007-01-19
> MXO02282.5prime
CAGTCGACATGGCCACAAGCAGCCAGCTGTTGCCCAATGGCAACTTGTCC
AGGAATGGCAAGACCAAGACAGAGGACGGTGAGGAGGTGGAAGCCGTTGT
TGGAGCTCGTGCAGCAGGTGCAGATGCCGGAGTAGCACTAACGGGACGAC
TAACAGGACACCCATCCACATCCGGAACGTTTATGAAACTGAAAACCTAT
CTCCTAGCTCTGCGTCCCTGGTCGCTGTCCGCCAGTCTGGTTCCAACGCT
GCTCGGCTCAGCCCTGGCCTACCGCTCCCAGTGGGCGGAGGAGTTTTCGC
TGGCCACCTTCTTTCTCACCGCCTTCACCGTGGTCACCGTCCACTGCGCC
GGCAACGTAGTTAACACCTATTTCGACTTCATCAAGGGCATTGACAAGCA
GAAAGCCGACGACCGCACGCTGGTGGATCACATACTCACCAAGGATGAGG
TGGTATCGCTGGGTGCCATTCTGTACATGGCTGGCTGTGGAGGATTTGTT
TTGCTGGCTGTGCTCAGTCCGGCGAAAATGGAGCACCTGGCACTGATCTA
CTTCGGGGGATTGTCCTCGAGCTTCCTGTACACCGGAGGCATTGGTTTCA
AGTACATCGCCCTGGGAGATCTGGTTATACTGATACTCTTTGGACCCATC
TCGGTGCTATTCGCCTTCATGTCGCANACAGGTCATTTGGACTGGACGAC
AATGGGCTATGCGATTCCTTTGGCTCTCAACACGGAGGCCATCCTGCACA
GCAACAACACAAGGGATGCGGAACACGATCGCCGGGCTGGAATCGTAACG
CTCGCCATTTTGATAGGCCGTACAGCATCGCACGTTCTGTATGCCATGCT
GCTCTTTGCACCCTACTCATTGTTTCTCATCTTCGGTT
MXO02282.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:41:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5876-PA | 1080 | heix-RA | 1..880 | 9..888 | 4281 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| heix-RA | 3130 | CG5876-RA | 546..1426 | 8..888 | 4334 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16298869..16299313 | 452..8 | 2225 | 100 | Minus |
| 2L | 23513712 | 2L | 16297755..16298195 | 888..448 | 2134 | 98.9 | Minus |
Blast to na_te.dros performed 2014-11-28 20:31:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| invader2 | 5124 | invader2 INVADER2 5124bp | 717..767 | 362..312 | 111 | 68.6 | Minus |
MXO02282.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:00 Download gff for
MXO02282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5876-PA | 1..880 | 9..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:01 Download gff for
MXO02282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| heix-RA | 538..1426 | 1..888 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:12 Download gff for
MXO02282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| heix-RA | 538..1426 | 1..888 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:12 Download gff for
MXO02282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16297755..16298193 | 450..888 | 98 | <- | Minus |
| 2L | 16298872..16299318 | 1..449 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:01 Download gff for
MXO02282.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16297755..16298193 | 450..888 | 98 | <- | Minus |
| arm_2L | 16298872..16299318 | 1..449 | 99 | | Minus |
