MXO02302.3prime Sequence
805 bp (726 high quality bases) assembled on 2007-01-19
> MXO02302.3prime
ATGGTCTAGAAAGCTTGCCTCAAAGCCCGCCGGTTGCATGAGGAACTGGT
GCTGGCTGCTCATTGTCGGCAGCTGTATGTCTTCCATGGTCATGGATGTC
TTGGGGATGTTGACGGCCTCCGCCGATCCTCCCGCCTCTGCATCATCCCC
CTCCAGCATGGCACTGTCGAAGCTCTTATTCAGACGATCGTGGAACTCGG
TCATGGAGATTTTCTTGAGTGCGAAACGCTTGCCAAAGGTCTTCTTCACC
TTCTGGCGGCGTCTCTTCGACAGGATTTTGTTCTTGTTCAGGCCATCGCT
GAAGGATATTGCCCGGCGGAGTTTGCGACCCCACACCTTAACTACTTTCA
CTTGGCTGCTGATGGAGCACTCTTCGCTGTCGTCCTCTGCATCGGCGGCA
TTCTCATCGCTGGGTTCCTCGAAGATTGTCTCCAGATTGGTGGGCGTGAA
CTTTTTCATGCGCCTGCTGGTGTAGATCTTTTCGATGCTTTTAAGTGTTT
GGGCATTTGTGTTCAGTTCTTTGCGTTGCTTCTTTTTGATGGGTTTCATG
ATGGCGCTGCAGATCCGGTTAAAGTTGTCCTTGGACACCCTGGCGGGCAT
TCTGCGACGAGCCACGCCCGCTCGAGCTCCAAAAGTGGAACTGCGTCTGG
AGGATCCACTGATGCAATCGCTGTCGTCATCGTTGTCCTCGCAGCGACTC
AATTGCGAGTCTACATCGTCGGAGTCATGCGATTCACTGCTGACATTGTC
CTCGGATTCGGGTGGAGCTATGGGCTCGGATGTGTCCTGCCTCTCCTCCA
TGTCC
MXO02302.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:42:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6586-PA | 900 | tan-RA | 111..897 | 805..19 | 3885 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tan-RB | 1657 | CG6586-RB | 426..1212 | 805..19 | 3905 | 99.7 | Minus |
| tan-RA | 1494 | CG6586-RA | 426..1212 | 805..19 | 3905 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6055771..6056557 | 805..19 | 3905 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:22:18 has no hits.
MXO02302.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:03 Download gff for
MXO02302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6586-PA | 111..900 | 18..805 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:13 Download gff for
MXO02302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tan-RA | 426..1212 | 19..805 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:51 Download gff for
MXO02302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tan-RA | 426..1212 | 19..805 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:51 Download gff for
MXO02302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6055771..6056557 | 19..805 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:13 Download gff for
MXO02302.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6048871..6049657 | 19..805 | 99 | | Minus |
MXO02302.5prime Sequence
822 bp (707 high quality bases) assembled on 2007-01-19
> MXO02302.5prime
CAGTCGACATGGATAACATAGTCTACGACTTTGCCAAGATCACGTTTCAA
GCAAAAGACAACAGGTCACCCACTACTAACTCGAATCTGTCGTGGCAACT
AAATCAGATGGCCTTGTCGGACATGGAGGAGATGCAGGACACATCCGAGC
CCATAGCTCCACCCGAATCCGATGACAATGTCAGCAGTGAATCGCATGAC
TCCGACGATGTAGACTCGCAATTGAGTCGCTGCGAGGACAACGATGACGA
CAGCGATTGCATCAGTGGATCCTCCAGACGCAGTTCCACTTTTGGAGCTC
GAGCGGGCGTGGCTCGTCGCAGAATGCCCGCCAGGGTGTCCAAGGACAAC
TTTAACCGGATCTGCAGCGCCATCATGAAACCCATCAAAAAGAAGCAACG
CAAAGAACTGAACACAAATGCCCAAACACTTAAAAGCATCGAAAAGATCT
ACACCAGCAGGCGCATGAAAAAGTTCACGCCCACCAATCTGGAGACAATC
TTCGAGGAACCCAGCGATGAGAATGCCGCCGATGCAGAGGACGACAGCGA
AGAGTGCTCCATCAGCAGCCAAGTGAAAGTAGTTAAGGTGTGGGGTCGCA
AACTCCGCCGGGCAATATCCTTCAGCGATGGCCTGAACAAGAACAAAATC
CTGTCGAAGAGACGCCGCCAGAAGGTGAAGAAGACCTTTGGCAAGCGTTT
CGCACTCAAGAAAATCTCCATGACCGAGTTCCACGATCGTCTGAATAAGA
GCTTCGACAGTGCCATGCTGGAGGGGGATGATGCAGAGGCGGGAGGATCG
GCGGAGGCCGTCCACATCCCCA
MXO02302.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:42:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6586-PA | 900 | tan-RA | 1..814 | 9..822 | 4045 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tan-RB | 1657 | CG6586-RB | 316..1129 | 9..822 | 4055 | 99.9 | Plus |
| tan-RA | 1494 | CG6586-RA | 316..1129 | 9..822 | 4055 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6055714..6056474 | 62..822 | 3790 | 99.9 | Plus |
| 3L | 28110227 | 3L | 6055608..6055665 | 9..66 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:22:29 has no hits.
MXO02302.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:04 Download gff for
MXO02302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6586-PA | 1..813 | 9..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:15 Download gff for
MXO02302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tan-RA | 316..1128 | 9..821 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:59 Download gff for
MXO02302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tan-RA | 316..1128 | 9..821 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:59 Download gff for
MXO02302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6055608..6055663 | 9..64 | 100 | -> | Plus |
| 3L | 6055717..6056473 | 65..821 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:15 Download gff for
MXO02302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6048708..6048763 | 9..64 | 100 | -> | Plus |
| arm_3L | 6048817..6049573 | 65..821 | 99 | | Plus |
