MXO02304.3prime Sequence
500 bp (436 high quality bases) assembled on 2007-01-19
> MXO02304.3prime
ATGGTCTAGAAAGCTTGCTTTTAGTTTCTTCTCTTTTTGCGGCGACAATT
TACCTTTCGAGGGCGATGATGAGCTGGCAGGAATAGTTTCTTTTGTTTTT
GCGGGCGTCGATGAAACCTTTTTCAGCTGTCGCTGCTGCCAGTAAACCGC
GAGGTAGACAAATGCCACCGAGATTATTACTTGGACAGTCAGCCACAGGA
CAATGTTGATGGCTTGCGTGCGCTCAAACAACTCCTTGCCATTCTTGATG
CACAGAATAGCTTCGGAGACCATGATGGCGCCGTAAACCCAACACTGGGT
GCCGACTCTCTTGCAGCGTGTGTCGGTGACATATACGTAATATTGCCTAA
CCGAAGGCGCCACAAACAGACCGATGAAAATGAGACGACCTATCACAATG
AAGTGATCCGGTGGCATCTCAAAGATGTGCTTCAAGAAGAATGTGTTCAG
CTCGGTGACCTGCCAGAAGATCACAAGCTGAATGACCGCGGCAAATCTCA
MXO02304.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:43:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4825-PA | 1497 | CG4825-RA | 1013..1494 | 500..19 | 2385 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4825-RA | 1896 | CG4825-RA | 1361..1842 | 500..19 | 2395 | 99.8 | Minus |
| CG4825-RB | 2046 | CG4825-RB | 1361..1839 | 500..19 | 2340 | 99.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20523352..20523566 | 136..350 | 1075 | 100 | Plus |
| 3L | 28110227 | 3L | 20523629..20523783 | 346..500 | 760 | 99.4 | Plus |
| 3L | 28110227 | 3L | 20523200..20523287 | 51..138 | 440 | 100 | Plus |
| 3L | 28110227 | 3L | 20522647..20522683 | 19..55 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:53:30 has no hits.
MXO02304.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:05 Download gff for
MXO02304.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4825-PA | 1014..1497 | 15..499 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:44 Download gff for
MXO02304.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4825-RA | 1362..1846 | 14..499 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:00 Download gff for
MXO02304.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4825-RA | 1362..1846 | 14..499 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:00 Download gff for
MXO02304.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20522643..20522681 | 14..53 | 95 | <- | Plus |
| 3L | 20523203..20523284 | 54..135 | 100 | <- | Plus |
| 3L | 20523352..20523562 | 136..346 | 100 | <- | Plus |
| 3L | 20523630..20523782 | 347..499 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:44 Download gff for
MXO02304.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20515743..20515781 | 14..53 | 95 | <- | Plus |
| arm_3L | 20516303..20516384 | 54..135 | 100 | <- | Plus |
| arm_3L | 20516452..20516662 | 136..346 | 100 | <- | Plus |
| arm_3L | 20516730..20516882 | 347..499 | 99 | | Plus |
