MXO02306.3prime Sequence
774 bp (737 high quality bases) assembled on 2007-01-19
> MXO02306.3prime
ATGGTCTAGAAAGCTTGCGATCAGAACCTGTGCACGATAGTGCTTCTGCA
GCTTATTGGCCTTGCAGCCGAGCTTCATCTGCCACTTGGACTGGACGCGC
TTCATCAGATGAATGTCGCGTGCCTTGCGGGCGGCGGACAGCTGCTGCGT
TTGCGTCCAGCCCAGAGCCCGGTACTCGCTGAGCACGCGGTGCAGTTTGC
GGTCGGACTTCTTGATGACGACGGCGCGTTCCGGACGAAGACGCTGCTTG
TAGTAGCGAAGCAGGGAGCGATGACCAATGACCGCGCCTGAGGGCAGCAC
CAGCTGATACTCATCGCCATCGAGCAGATCCGGCACCACCTCTTCGTCAA
TGTCCATGCCCTCATTATTGTCCGGATAACTGCTGCTGTAGTCGTAGTAT
TCGGCATACTCGGCCAGCGCCACACCCTCGTGCAGCATCTGGCAGTGGCC
CTTGTCGATCATGTGTTTGCGCACGGCGTCCAGGGAATAGAAGGTCTTGC
CGCGATCGTTGCAGAACAGGCAGATGAAGTAGTTGGCCACCTTCTCGCCC
AGGTAGTACAGAAGGCCCTCGATGTCCGTGCAGTACTCGGTGTCCGGAAT
GAAGAACGAGTGCGCCACGGACATGTGCTTTAGGTTCTCCACCAGATCCT
CGCTGGCATGTGTGCAGAACAGGCAGTCGCGCTCGGTCAGCGGATTCTCG
GGTATCTTGTCCCACTCATCGGAATCCACCTCCTCCTCTTCAATGTCCTC
GAAATCATCGTCGTCCTCGTCGAC
MXO02306.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:43:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6769-PA | 1230 | CG6769-RA | 472..1227 | 774..19 | 3780 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6769-RB | 1543 | CG6769-RB | 634..1389 | 774..19 | 3780 | 100 | Minus |
CG6769-RA | 1468 | CG6769-RA | 634..1389 | 774..19 | 3780 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17861836..17862200 | 731..367 | 1825 | 100 | Minus |
X | 23542271 | X | 17862274..17862621 | 366..19 | 1740 | 100 | Minus |
X | 23542271 | X | 17861635..17861681 | 774..728 | 235 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:53:40 has no hits.
MXO02306.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:06 Download gff for
MXO02306.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6769-PA | 472..1230 | 15..774 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:52 Download gff for
MXO02306.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6769-RA | 634..1392 | 15..774 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:05 Download gff for
MXO02306.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6769-RA | 634..1392 | 15..774 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:05 Download gff for
MXO02306.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17861635..17861679 | 730..774 | 100 | -> | Minus |
X | 17861838..17862200 | 367..729 | 100 | -> | Minus |
X | 17862274..17862624 | 15..366 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:52 Download gff for
MXO02306.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17755668..17755712 | 730..774 | 100 | -> | Minus |
arm_X | 17755871..17756233 | 367..729 | 100 | -> | Minus |
arm_X | 17756307..17756657 | 15..366 | 99 | | Minus |
MXO02306.5prime Sequence
701 bp (700 high quality bases) assembled on 2007-01-19
> MXO02306.5prime
CAGTCGACATGTCGCACTTCACCTGCCTGAACTGCGATGCCCGCTTCGCC
AGCGCGGATGTGCAGCGGAATCACTACAAGACCGACTGGCATCGCTACAA
TCTGAAGCGCAGGGTGGCCCAGCTGCCGCCCGTTACGGCCGAGGAGTTCC
AGCAGCGCGTTCTTAGCGCCCGCAGCGCCACGGACGCGGCACTCGAGGAG
CAGAACCTAAGTGTCTACTGCCACGCCTGCAGACGCCAATTCGCCAGCCA
GAAGGCGCACGACAACCACCTGAACAGCCGCAAGCACAAGGAGCTGCTGG
CCCGCTTCGAGCGCGAGCAGATGACAGCTAGCGGCGGCAGCGCCAGCACC
GCCACATCCGTGTGCACGCGCAGCGTCGTGGAGCAGTTTTTCCATCCGGC
CCTGGCCGCCGCAGCCGCTGGCAAGGGTCGACTGGCCTTCGCGGAGCGGG
TGGTCAAGGCCAATAACGACGAGGAGATGGTCGACGAGGACGACGATGAT
TTCGAGGACATTGAAGAGGAGGAGGTGGATTCCGATGAGTGGGACAAGAT
ACCCGAGAATCCGCTGACCGAGCGCGACTGCCTGTTCTGCACACATGCCA
GCGAGGATCTGGTGGAGAACCTAAAGCACATGTCCGTGGCGCACTCGTTC
TTCATTCCGGACACCGAGTACTGCACGGACATCGAGGGCCTTCTGTACTA
C
MXO02306.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:43:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6769-PA | 1230 | CG6769-RA | 1..378 | 9..386 | 1890 | 100 | Plus |
CG6769-PA | 1230 | CG6769-RA | 384..693 | 392..701 | 1550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6769-RB | 1543 | CG6769-RB | 163..855 | 9..701 | 3390 | 99.3 | Plus |
CG6769-RA | 1468 | CG6769-RA | 163..855 | 9..701 | 3390 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17861164..17861681 | 9..526 | 2515 | 99 | Plus |
X | 23542271 | X | 17861836..17862014 | 523..701 | 895 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:19:40 has no hits.
MXO02306.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:06 Download gff for
MXO02306.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6769-PA | 1..693 | 9..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:41 Download gff for
MXO02306.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6769-RA | 153..855 | 1..701 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:17 Download gff for
MXO02306.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6769-RA | 153..855 | 1..701 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:17 Download gff for
MXO02306.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17861154..17861679 | 1..524 | 98 | -> | Plus |
X | 17861838..17862014 | 525..701 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:41 Download gff for
MXO02306.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17755871..17756047 | 525..701 | 100 | | Plus |
arm_X | 17755187..17755712 | 1..524 | 98 | -> | Plus |