MXO02307.5prime Sequence
722 bp (721 high quality bases) assembled on 2007-01-19
> MXO02307.5prime
CAGTCGACATGTTCTTGATGACAGCCGGCACCTCCAATTTTCTTTCTGCA
GCCTGGAGATCAGAGGCTGAGGAGTCCAAGAGTAAGGAGAACGGGAGTCT
CTGCTGCTGCGAGTACGTGGCTGAGGACAGTCGAGAGCGATCCCACATCC
TAGGATGCTGTTGTAACTGCGTGGACTTCGACTTAGTTTGCACAAGACTT
GTCACCTGCCGAGCCATTGATCGAAGGAACATCGACGGCATGCTCATCGC
CTTCCAGGATAGACTGCGCTTGCCATGGCGCGGAGGAGCCAAGCGAATCT
CGCCCGCAGCCGTTGCTCCCGCCTTCATTGTCCCCCTCATGCTGGGATTG
GCCACTCTGAACTCAAAGACCGCCATAGTGCTGATGCTCACGCTGGTGGG
CTTCACCATCTGGGGCATGGAGCTGGCTAAGCGGACCGCCACGCGGACAA
ACTTCTTTTTGAGCTGGCTGGTCTTCTCGGTGTTCTACATGATCATCATA
TTTGAGTTTCAGGTTCCTCTGCTGGAGCTGGCTCCGGAGGAGAACTACGC
GTTAATGTTCTTCTCCTGTGCCGCTTTGTACTGCCTCTATTCCGCCAAGG
CACTGTCGCCCTTGAATCTTGTTTCTGCTCAATACGGAACCACGCCCAAG
GATGAGCTGCCTGGGATCGCCGAGGCTTCGAGTGGCGAGGAGCAGGCAGA
GGCCCAGACCACACTCCAGATG
MXO02307.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:44:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17257-PB | 1263 | CG17257-RB | 1..714 | 9..722 | 3570 | 100 | Plus |
CG17257-PA | 1263 | CG17257-RA | 1..714 | 9..722 | 3570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GABPI-RA | 1650 | CG17257-RA | 222..935 | 9..722 | 3570 | 100 | Plus |
GABPI-RB | 1556 | CG17257-RB | 128..841 | 9..722 | 3570 | 100 | Plus |
GABPI-RD | 1450 | CG17257-RD | 38..735 | 25..722 | 3490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3030998..3031525 | 195..722 | 2640 | 100 | Plus |
2L | 23513712 | 2L | 3030760..3030947 | 9..196 | 940 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:19:46 has no hits.
MXO02307.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:07 Download gff for
MXO02307.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17257-PA | 1..714 | 9..722 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:43 Download gff for
MXO02307.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GABPI-RB | 124..844 | 1..722 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:21 Download gff for
MXO02307.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GABPI-RB | 121..841 | 1..722 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:21 Download gff for
MXO02307.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3031000..3031525 | 197..722 | 100 | | Plus |
2L | 3030753..3030947 | 1..196 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:43 Download gff for
MXO02307.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3030753..3030947 | 1..196 | 97 | -> | Plus |
arm_2L | 3031000..3031525 | 197..722 | 100 | | Plus |
MXO02307.3prime Sequence
722 bp (697 high quality bases) assembled on 2007-01-19
> MXO02307.3prime
ATGGTCTAGAAAGCTTGCCTTTAAGATGGCTCGCCAGTTGCTCCAGATTC
TGTTGCGTCCTGCGGCGTTGGAGGTGCGCTTGTATTCGTGCAAGGTGGAT
CCCTTCCACCACAAGTAAGCCTGTCTAGCGAGTATAAAGGCTATGTAGGA
AGAAATGAGCAGAGCGTAGCAAGCCACCACAAAGGAGATTCCGAGGTCGA
AGCCTTCGAACACCTCACTGCAGTCGTCGGGCAAAAGAACTGGATAACCA
AGCGGTCGCACCACCATAAACGGATGGCAAATGGAAGTGAGGGTCAAGTT
TGCGCCGAGCAGCAGAGCGATCTCCGACAGGGCCAGTCCAACAATGTACC
ACACGTAGTTCCGCTCGCCAATGCAGCAGTTTAGCCAGTAGCTGTGATGA
TCGCGCCTCTTCACGCAGGTTCCGCAGACGGGACAGTGGTATGCCCGCCT
TGGAGTAACCTTCCGGCAGATCTCGCAGATATTGGGCTGACCGTGCATCA
AGCCAGATCGCTCAGCAGTGTCCATATCCCCCACCTCGTCATCATCCAAA
CTCAGCACACTCTCCATCTGGAGTGTGGTCTGGGCCTCTGCCTGCTCCTC
GCCACTCGAAGCCTCGGCGATCCCAGGCAGCTCATCCTTGGGCGTGGTTC
CGTATTGAGCAGAAACAAGATTCAAGGGCGACAGTGCCTTGGCGGAATAG
AGGCAGTACAAAGCGGCACAGG
MXO02307.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:43:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17257-PB | 1263 | CG17257-RB | 557..1260 | 722..19 | 3520 | 100 | Minus |
CG17257-PA | 1263 | CG17257-RA | 557..1260 | 722..19 | 3520 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GABPI-RD | 1450 | CG17257-RD | 578..1281 | 722..19 | 3520 | 100 | Minus |
GABPI-RC | 1702 | CG17257-RC | 830..1533 | 722..19 | 3520 | 100 | Minus |
GABPI-RA | 1650 | CG17257-RA | 778..1481 | 722..19 | 3520 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3031368..3031893 | 722..197 | 2630 | 100 | Minus |
2L | 23513712 | 2L | 3031954..3032131 | 196..19 | 890 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:34:36 has no hits.
MXO02307.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:07 Download gff for
MXO02307.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17257-PA | 557..1263 | 16..722 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:29:15 Download gff for
MXO02307.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GABPI-RB | 687..1395 | 12..722 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:17:37 Download gff for
MXO02307.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GABPI-RA | 778..1486 | 12..722 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:37 Download gff for
MXO02307.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3031368..3031893 | 197..722 | 100 | -> | Minus |
2L | 3031954..3032136 | 12..196 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:29:15 Download gff for
MXO02307.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3031368..3031893 | 197..722 | 100 | -> | Minus |
arm_2L | 3031954..3032136 | 12..196 | 97 | | Minus |