MXO02309.3prime Sequence
848 bp (761 high quality bases) assembled on 2007-01-19
> MXO02309.3prime
ATGGTCTAGAAAGCTTGCAGGCAAAAACTGCATGCTGGGAATAAAAGTCA
ATGCCTTGGAAGTGGGGCTTTTGGGATTCCCCAGATCTTTGGCGATTCCC
TGCACGCGGGCCACCACGTCACTGCGCTGGATATCGCCCCGGTCCAACAT
CCTTTTAAATAGAGTATACAATTGCCTGGCCGCCGAAACCTGTGACAAGG
CATGCAGCTCCACCAGCAGATTCTCGGAATATCCCTCGTACTTGCTCAGA
CTCGCCGCCTTAGCATCGCGCTTTAGCAGATCGTAAACCAGCAGGAAATC
CACATAGGGCTTAGTGGGAGGAACTCTCTTTTTGCCTGCGATCGAGGCGG
TGCTCCATCGATCCATCGCGGACTCAGAACCGAAAGCGGCCCTTCCGTAG
TTATCGTCGTAGAGGCGCAAAAAGTTATCCAGTGACTCCACATCGTTGGT
AAAGTCGTAGCGCTCGCTTTGAATATCACGGATCAAAGACAAAGGCAGGG
TATCAAAGTCGCTATCATCTTTGATTTCTGCAAATAGATCGTTGCCCTCA
AGGGACTTTTCCGGCGGCGCAGTTGGTGCAAAAATTGCCGGACGGTGCGG
CACAGTGGGTGGCGATGTGGGTCTCTCGGTTGTGGATGATCTCTTCGGCG
TTTCCCACCAACTTGGCGGCTGCCACCAGCCCATGCCACCAGATCCAGAC
GCACCTGCTCCAATCGGTCGCCTTGTGGTAGTGGTTCTCATCCTCGTGGG
CAACGGTGTGGATGGGCGCGGATTTGCAGTGGTGGATTCCATACCTTCTT
CATCCGCACTGAAAGGAGGCTCCACTGTTGTGCTTGATAGTGGCTCGT
MXO02309.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:44:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2723-PA | 978 | ImpE3-RA | 146..971 | 848..23 | 4130 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpE3-RB | 1094 | CG2723-RB | 211..1040 | 848..19 | 4135 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8028507..8029336 | 19..848 | 4135 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:20:41 has no hits.
MXO02309.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:08 Download gff for
MXO02309.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2723-PA | 146..978 | 15..848 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:02 Download gff for
MXO02309.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpE3-RB | 211..1051 | 6..848 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:47 Download gff for
MXO02309.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpE3-RB | 211..1051 | 6..848 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:47 Download gff for
MXO02309.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8028496..8029336 | 6..848 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:02 Download gff for
MXO02309.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3854218..3855058 | 6..848 | 99 | | Plus |
MXO02309.5prime Sequence
617 bp (332 high quality bases) assembled on 2007-01-19
> MXO02309.5prime
CAATCCACATGCGCAGTGGGCTAACGGTTCGTCCAATGCTGGTGGTGCTT
CTAGTGGGTCACCTAGTGGATCCAGTGGCGCCGGCTAACCTACTGACTAG
CTATCTGCCCGCCTCCATGCAGGCCTTGACATACTATATTGACCTGCTGC
AGTACGAGCCACTATCAAGCACAACAGTGGAGCCTCCTTTCAGTGCGGAT
GAAGAAGGTATGGAATCCACCACTGCAAATCCGCGCCCATCCACACCGTT
GCCCACGAGGATGAGAACCACTACCACAAGGCGACCGATTGGAGCAGGTG
CGTCTGGATCTGGTGGCATGGGCTGGTGGCAGCCGCCAAGTTGGTGGGAA
ACGCCGAAGAGATCGTCCACAACCGAGAGACCCACATCGCCCCCCACTGT
GCCGCACCGTCCGGCAATTTTTGCACCAACTGCGCCGACGGAAAAGTCCC
TTGAGGGCAACGATCTATTTGCAGAAATCAAAGATGATAGCGACTTTGAT
ACCCTGCCTTTGTCTTTGATCCGTGATATTCAAAGCGAGCGCTACGACTT
TACCAACGATGTGGAGTCACTGGATAACTTTTTGCGCATCTACAACGATA
ACTACAGAAGGTCCGCT
MXO02309.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:44:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2723-PA | 978 | ImpE3-RA | 1..609 | 9..617 | 2845 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:33:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
ImpE3-RB | 1094 | CG2723-RB | 66..674 | 9..617 | 2925 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8028873..8029481 | 617..9 | 2925 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:33:13 has no hits.
MXO02309.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:08 Download gff for
MXO02309.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2723-PA | 1..609 | 9..617 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:36:55 Download gff for
MXO02309.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpE3-RB | 66..674 | 9..617 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:12 Download gff for
MXO02309.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
ImpE3-RB | 66..674 | 9..617 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:12 Download gff for
MXO02309.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8028873..8029481 | 9..617 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:36:55 Download gff for
MXO02309.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3854595..3855203 | 9..617 | 98 | | Minus |