MXO02313.3prime Sequence
490 bp (463 high quality bases) assembled on 2007-01-19
> MXO02313.3prime
ATGGTCTAGAAAGCTTGCGACCAAATTATATTCCTTAAGGTTCGATTGCA
GAATTGTGTCCTTAACAGCTGCAAACACAAACCTTATATTTTCCGTATCT
GTAGCACACGTGAAATGAGAATAGATAATTTTTTCGGAATCTGGATTTAA
ATCTACAAACATTCGCAGTATAAACTCTCGGGCCGTTATTGCATCTCGCT
GAGGACCATCGTATTCAGGAAAATAGTCTACCAAATGCGAATACATTATT
TTCTCTTCCAACAAGTCCTTCTTATTCAGGAAAAGAATAACTGACGAATT
TTGAAACCAAGGGTATGTAATTATAGTACGAAATAAAGCTTTAGATTCCT
CCATTCGATTCACATTATCAGATTCAAACAATATTTCCCCCCCCCCCGAT
AGCGCTACCAAAAATATAAAAGAAGACACATTCTCAAAGCAATGAATCCA
CTTTCTTCTCTCGGATCGCTGACCACCGACGTCTACCATT
MXO02313.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:45:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17759-PA | 1062 | Galpha49B-RA | 697..1059 | 381..19 | 1790 | 99.7 | Minus |
| CG17759-PG | 1062 | Galpha49B-RG | 697..1059 | 381..19 | 1790 | 99.7 | Minus |
| CG17759-PC | 1062 | Galpha49B-RC | 697..1059 | 381..19 | 1790 | 99.7 | Minus |
| CG17759-PE | 1062 | Galpha49B-RE | 697..1059 | 381..19 | 1790 | 99.7 | Minus |
| CG17759-PH | 1062 | Galpha49B-RH | 697..1059 | 381..19 | 1790 | 99.7 | Minus |
| CG17759-PB | 1062 | Galpha49B-RB | 697..1059 | 381..19 | 1790 | 99.7 | Minus |
| CG17759-PD | 1062 | Galpha49B-RD | 697..875 | 381..203 | 870 | 99.4 | Minus |
| CG17759-PF | 1062 | Galpha49B-RF | 697..875 | 381..203 | 870 | 99.4 | Minus |
| CG17759-PA | 1062 | Galpha49B-RA | 588..651 | 490..427 | 320 | 100 | Minus |
| CG17759-PG | 1062 | Galpha49B-RG | 588..651 | 490..427 | 320 | 100 | Minus |
| CG17759-PC | 1062 | Galpha49B-RC | 588..651 | 490..427 | 320 | 100 | Minus |
| CG17759-PE | 1062 | Galpha49B-RE | 588..651 | 490..427 | 320 | 100 | Minus |
| CG17759-PH | 1062 | Galpha49B-RH | 588..651 | 490..427 | 320 | 100 | Minus |
| CG17759-PB | 1062 | Galpha49B-RB | 588..651 | 490..427 | 320 | 100 | Minus |
| CG17759-PD | 1062 | Galpha49B-RD | 588..651 | 490..427 | 320 | 100 | Minus |
| CG17759-PF | 1062 | Galpha49B-RF | 588..651 | 490..427 | 320 | 100 | Minus |
| CG30054-PC | 1062 | CG30054-RC | 823..875 | 255..203 | 240 | 98.1 | Minus |
| CG30054-PC | 1062 | CG30054-RC | 955..1033 | 123..45 | 145 | 87.3 | Minus |
| CG17760-PB | 1062 | CG17760-RB | 595..638 | 483..440 | 145 | 93.1 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG45086-RB | 3050 | CG45086-RB | 1902..2373 | 490..19 | 2165 | 97.2 | Minus |
| CG45086-RA | 3017 | CG45086-RA | 1869..2340 | 490..19 | 2165 | 97.2 | Minus |
| Galphaq-RK | 5648 | CG17759-RK | 1123..1594 | 490..19 | 2165 | 97.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12617986..12618142 | 361..205 | 785 | 100 | Minus |
| 2R | 25286936 | 2R | 12618442..12618550 | 207..99 | 545 | 100 | Minus |
| 2R | 25286936 | 2R | 12617795..12617922 | 490..363 | 460 | 90.6 | Minus |
| 2R | 25286936 | 2R | 12619062..12619143 | 100..19 | 410 | 100 | Minus |
| 2R | 25286936 | 2R | 12624753..12624909 | 361..205 | 380 | 82.8 | Minus |
| 2R | 25286936 | 2R | 12627970..12628126 | 361..205 | 305 | 79.6 | Minus |
| 2R | 25286936 | 2R | 12627789..12627870 | 488..407 | 215 | 84.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:20:49 has no hits.
MXO02313.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:11 Download gff for
MXO02313.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17759-PG | 588..1062 | 15..490 | 96 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:04 Download gff for
MXO02313.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphaq-RC | 1090..1567 | 12..490 | 96 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:49 Download gff for
MXO02313.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphaq-RK | 1123..1600 | 12..490 | 96 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:49 Download gff for
MXO02313.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12617987..12618140 | 207..360 | 100 | -> | Minus |
| 2R | 12618443..12618550 | 99..206 | 100 | -> | Minus |
| 2R | 12619064..12619149 | 12..98 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:04 Download gff for
MXO02313.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8505492..8505645 | 207..360 | 100 | -> | Minus |
| arm_2R | 8505948..8506055 | 99..206 | 100 | -> | Minus |
| arm_2R | 8506569..8506654 | 12..98 | 96 | | Minus |
MXO02313.5prime Sequence
655 bp (653 high quality bases) assembled on 2007-01-19
> MXO02313.5prime
CAGTCGACATGGAGTGCTGTTTATCGCAGGAGGCCAAGGAACAAAAGCGC
ATCAATCAGGAAATCGAGAAGCAGTTGCGCCGGGACAAGAGAGATGCGCG
CCGCGAGCTTAAACTGCTACTACTGGGCACTGGCGAGTCCGGGAAGTCCA
CATTCATCAAACAGATGCGTATTATCCACGGCAGCGGTTACTCGGACGAG
GACAAGCGTGGGTACATCAAGCTGGTTTTTCAGAACATATTCATGGCCAT
GCAGTCAATGATCAAGGCCATGGATATGCTGAAGATTTCCTACGGCCAGG
GAGAGCATAGTGAACTGGCCGATCTGGTGATGAGCATCGATTATGAGACC
GTTACCACGTTCGAGGATCCATACTTGAATGCCATCAAAACGCTTTGGGA
CGATGCTGGCATCCAGGAGTGCTATGATCGTCGTAGGGAATATCAGCTGA
CTGATTCAGCCAAATATTATCTGAAGGATCTCGATCGTGTGGCTCAACCT
GCATATTTACCCACTGAGCAAGACATTTTAAGAGTTCGTGTGCCCACAAC
AGGGATAATTGAGTATCCCTTTGATTTAGAAGAAATCAGATTTAGAATGG
TAGACGTCGGTGGTCAGCGATCCGAGAGAAGAAAGTGGATTCATTGCTTT
GAGAA
MXO02313.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:45:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17759-PA | 1062 | Galpha49B-RA | 1..647 | 9..655 | 3210 | 99.8 | Plus |
| CG17759-PG | 1062 | Galpha49B-RG | 1..647 | 9..655 | 3210 | 99.8 | Plus |
| CG17759-PC | 1062 | Galpha49B-RC | 1..647 | 9..655 | 3210 | 99.8 | Plus |
| CG17759-PE | 1062 | Galpha49B-RE | 1..647 | 9..655 | 3210 | 99.8 | Plus |
| CG17759-PH | 1062 | Galpha49B-RH | 1..647 | 9..655 | 3210 | 99.8 | Plus |
| CG17759-PB | 1062 | Galpha49B-RB | 1..647 | 9..655 | 3210 | 99.8 | Plus |
| CG17759-PD | 1062 | Galpha49B-RD | 1..458 | 9..466 | 2265 | 99.7 | Plus |
| CG17759-PF | 1062 | Galpha49B-RF | 1..458 | 9..466 | 2265 | 99.7 | Plus |
| CG30054-PC | 1062 | CG30054-RC | 125..449 | 133..457 | 1525 | 98.7 | Plus |
| CG17759-PD | 1062 | Galpha49B-RD | 583..647 | 591..655 | 325 | 100 | Plus |
| CG17759-PF | 1062 | Galpha49B-RF | 583..647 | 591..655 | 325 | 100 | Plus |
| CG17760-PB | 1062 | CG17760-RB | 364..450 | 372..458 | 285 | 93.1 | Plus |
| CG17760-PB | 1062 | CG17760-RB | 595..638 | 603..646 | 145 | 93.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG45086-RB | 3050 | CG45086-RB | 1314..1961 | 8..655 | 3225 | 99.8 | Plus |
| CG45086-RA | 3017 | CG45086-RA | 1281..1928 | 8..655 | 3225 | 99.8 | Plus |
| Galphaq-RK | 5648 | CG17759-RK | 535..1182 | 8..655 | 3225 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12616539..12616725 | 126..312 | 935 | 100 | Plus |
| 2R | 25286936 | 2R | 12623908..12624087 | 133..312 | 870 | 98.9 | Plus |
| 2R | 25286936 | 2R | 12616787..12616941 | 312..466 | 775 | 100 | Plus |
| 2R | 25286936 | 2R | 12624149..12624294 | 312..457 | 700 | 98.6 | Plus |
| 2R | 25286936 | 2R | 12617072..12617200 | 467..595 | 645 | 100 | Plus |
| 2R | 25286936 | 2R | 12616296..12616415 | 8..127 | 585 | 99.2 | Plus |
| 2R | 25286936 | 2R | 12627238..12627383 | 313..458 | 460 | 87.7 | Plus |
| 2R | 25286936 | 2R | 12617793..12617854 | 594..655 | 310 | 100 | Plus |
| 2R | 25286936 | 2R | 12627785..12627841 | 594..650 | 195 | 89.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:53:50 has no hits.
MXO02313.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:12 Download gff for
MXO02313.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17759-PG | 1..645 | 9..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:57 Download gff for
MXO02313.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphaq-RC | 494..1149 | 1..655 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:10 Download gff for
MXO02313.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphaq-RK | 527..1182 | 1..655 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:10 Download gff for
MXO02313.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12616288..12616414 | 1..126 | 96 | -> | Plus |
| 2R | 12616540..12616724 | 127..311 | 100 | -> | Plus |
| 2R | 12616787..12616941 | 312..466 | 100 | -> | Plus |
| 2R | 12617072..12617200 | 467..595 | 100 | -> | Plus |
| 2R | 12617795..12617854 | 596..655 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:57 Download gff for
MXO02313.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8503793..8503919 | 1..126 | 96 | -> | Plus |
| arm_2R | 8504045..8504229 | 127..311 | 100 | -> | Plus |
| arm_2R | 8504292..8504446 | 312..466 | 100 | -> | Plus |
| arm_2R | 8504577..8504705 | 467..595 | 100 | -> | Plus |
| arm_2R | 8505300..8505359 | 596..655 | 100 | | Plus |
