MXO02317.3prime Sequence
812 bp (734 high quality bases) assembled on 2007-01-19
> MXO02317.3prime
ATGGTCTAGAAAGCTTGCGTTATTGGCCGCCATTGGCTTGCCGAGGACAC
GCATGGCATTGGAGTAGTCCGAATCGATCTGCGGAATGATCTGCTGTTCG
TTGGGCCGCAGGGTGCGTATCAGATCGTTGAGTGACAGGGAGGATTGGGG
GGTCAGCTCCTCCTTGGGCTGCAGCTCCTGGGAGCTGGCCATTTTCTGGA
AGTCCTGGGCGATCTGCTTGATGCGCTCCTCGATGGCGGCGGCTGGGGAT
TCAGTGGAGCTGGGCATCGCCAATGGTTCGTTGGCCTTGATAAGATCCAC
CGGCGTCTCATTTTCCAAGTCAGTCTCGCCCTCAGCTCCATCCTGCTCGT
GCTCTCCATCCGCCTCCGCATCGTGTTGCTTTTTCTCGTTATCCTCAGCC
GCCGCGGGAGCTGGTGCCGAGTCCGCATCCGCATCCTCCTGCTGCAACTG
CTGCTGTACCTCTTCGATCGAATGCACCTCGGGGTGGAGTTCGTTGTCGC
TCAGTGGGAATACGTGCTCCTTGATATCGCCATCGTTGTCGTTGCTCAGC
TCACGGGCATGCTCCTCGAAGTTGTCGTGCTCGTCATGCTCCTCTTCGCC
CTCGGCCTCATGGTCATCGTGCTCCTCGCCATCCAAATCCGCTTCCTGAT
CCTCCACATCCACGTCAGTGGAATCCGTATCGGGCAGCGAGCGATCATGG
TTCAGCTTAAAGGACATAAACGAGGGTTGCTGCTGGGAGCTGGAATCATC
GATCAGTCGGTGGCCAACGGCTGGCGAAAATTTGGCCTTGGCAGCGGTGT
ACATTGCTCCAC
MXO02317.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:46:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4844-PA | 852 | CG4844-RA | 56..484 | 812..384 | 2120 | 99.7 | Minus |
CG4844-PB | 852 | CG4844-RB | 56..484 | 812..384 | 2120 | 99.7 | Minus |
CG4844-PA | 852 | CG4844-RA | 489..849 | 379..19 | 1805 | 100 | Minus |
CG4844-PB | 852 | CG4844-RB | 489..849 | 379..19 | 1805 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43164-RE | 2012 | CG43164-RE | 909..1702 | 812..19 | 3895 | 99.4 | Minus |
CG43164-RC | 2338 | CG43164-RC | 1235..2028 | 812..19 | 3895 | 99.4 | Minus |
CG43164-RB | 2447 | CG43164-RB | 1344..2137 | 812..19 | 3895 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17507542..17508335 | 812..19 | 3895 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:54:21 has no hits.
MXO02317.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:15 Download gff for
MXO02317.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4844-PB | 56..852 | 18..812 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:15 Download gff for
MXO02317.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43164-RB | 1344..2142 | 13..812 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:24 Download gff for
MXO02317.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43164-RB | 1344..2142 | 13..812 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:24 Download gff for
MXO02317.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17507542..17508340 | 13..812 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:15 Download gff for
MXO02317.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13395047..13395845 | 13..812 | 99 | | Minus |
MXO02317.5prime Sequence
712 bp (633 high quality bases) assembled on 2007-01-19
> MXO02317.5prime
CAGTCGACATGAACCTGCATGTGGCCGCCACCACCACACCCTTGCCCCTG
CTGATGTCCACCAGTGGAGCAATGTACACCGCTGCCAAGGCCAAATCTTC
GCCAGCCGTTGGCCACCGACTGATCGATGATTCCAGCTCCCAGCAGCAAC
CCTCGTTTATGTCCTTTAAGCTGAACCATGATCGCTCGCTGCCCGATACG
GATTCCACTGACGTGGATGTGGAGGATCAGGAAGCGGATTTGGATGGCGA
GGAGCACGATGACCATGAGGCCGAGGGCGAAGAGGAGCATGACGAGCACG
ACAACTTCGAGGAGCATGCCCGTGAGCTGAGCAACGACAACGATGGCGAT
ATCAAGGAGCACGTATTCCCACTGAGCGACAACGAACTCCACCCCGAGGT
GCATTCGATCGAAGAGGTACAGCAGCAGTTGCAGCAGGAGGATGCGGATG
CGGACTCGGCACCAGCTCCCGCGGCGGCTGAGGATAACGAGAGCTCGCAA
CACGATGCGGAGGCGGATGGAGAGCACGAGCAGGATGGAGCTGAGGGCGA
GACTGACTTGGAAAATGAGACGCCGGTGGATCTTATCAAGGCCAACGAAC
CATTGGCGATGCCCAGCTCCACTGAATCCCCAGCCGCCGCCATCGAGGAG
CGCATCAAGCAGATCGCCCAGAACTTCCAGAAAATGGCCAGCTCCCAGGA
GCTGCAGCCCAA
MXO02317.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:46:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4844-PA | 852 | CG4844-RA | 1..704 | 9..712 | 3495 | 99.8 | Plus |
CG4844-PB | 852 | CG4844-RB | 1..704 | 9..712 | 3495 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43164-RE | 2012 | CG43164-RE | 854..1557 | 9..712 | 3505 | 99.9 | Plus |
CG43164-RC | 2338 | CG43164-RC | 1180..1883 | 9..712 | 3505 | 99.9 | Plus |
CG43164-RB | 2447 | CG43164-RB | 1289..1992 | 9..712 | 3505 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17507487..17508190 | 9..712 | 3505 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:25:49 has no hits.
MXO02317.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:15 Download gff for
MXO02317.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4844-PB | 1..702 | 9..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:40 Download gff for
MXO02317.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43164-RB | 1289..1990 | 9..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:43 Download gff for
MXO02317.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43164-RB | 1289..1990 | 9..710 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:43 Download gff for
MXO02317.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17507487..17508188 | 9..710 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:40 Download gff for
MXO02317.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13394992..13395693 | 9..710 | 99 | | Plus |