MXO02319.3prime Sequence
817 bp (760 high quality bases) assembled on 2007-01-19
> MXO02319.3prime
ATGGTCTAGAAAGCTTGCGAGAAAGCTCTCCCTCGCCCCGTGCCTCTCAT
CGCCCAGCATCACCCGCTGCGAGGGAGGCTCGCCATACTGATCCTGGTAG
TAGTTCTCCCGCATCATGGTGTTCAGGCTGGAGCAGCGGAAGTAGAGGAT
CTCCTGGAAGGGTTTGCGGAAATCCCTGTTCAGAGTGGCGTAGATAATAG
GGTTCAGCAGGGAGTTGGCATAGCCCAGCCAGAGGAATAGAGACGAGAGC
GATGCCGGTACGTGCATTGTCTCGAAAGGACGAATTAGGGCCAGGATAAA
GAATGGCAGCCAGCAGACGGTAAAGGCCGACATGATGATGCCCAGAGTGG
TGGAGGCCTTCTTCTCTTTGGCCAGTTGAAACCGCAGCTTCTTGTGGTGC
GGAGAGCCCAGGAGTCCGGTCGAACCACTAACGCCACCCCCACTGCCGTG
CCCAGCCAGTGCGCCTCCTCCGCTGCTCAGACCCCCACAGGTGGAGTAGG
TGAGCGAAGTGTTGCCCACGCTGCTGTGCCTCTGGCCATTTCCCGAGCTG
GCCAGCTCCGTGTGGCCCAAGGGCGGAGCCTGCGGGGCCGATGGCGATCC
TGTGCCATTGAGCGCCTGTTGCAAATGCGTCTGGGCGCGTTTCTCTTCCA
GGACAATCCGCCTCGCCGCCCTGAAGATCTGGTAGTACACAAACAGCATC
ACCGAGAGTGGTATGTAAAATGAGCCCAGGGTGGCGTAGATCTGATATGC
GAAGTTCTGGCACACCGTGCAGATAGGCTGGCCCTCCTCGTCCTCGTGCT
CGTTGCCCAGGATCAGC
MXO02319.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:47:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12073-PA | 1695 | 5-HT7-RA | 894..1692 | 817..19 | 3995 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
5-HT7-RB | 4486 | CG12073-RB | 2037..2835 | 817..19 | 3995 | 100 | Minus |
5-HT7-RA | 3506 | CG12073-RA | 1963..2761 | 817..19 | 3995 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30969887..30970685 | 19..817 | 3995 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:05:51 has no hits.
MXO02319.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:16 Download gff for
MXO02319.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12073-PA | 894..1695 | 18..817 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:49 Download gff for
MXO02319.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
5-HT7-RA | 1963..2766 | 13..817 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:13 Download gff for
MXO02319.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
5-HT7-RA | 1963..2766 | 13..817 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:13 Download gff for
MXO02319.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30969882..30970685 | 13..817 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:49 Download gff for
MXO02319.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26795604..26796407 | 13..817 | 99 | | Plus |
MXO02319.5prime Sequence
780 bp (711 high quality bases) assembled on 2007-01-19
> MXO02319.5prime
CAGTCGACATGGCTTTATCTGGACAGGACTGGCGGCGCCATCAGAGCCAC
CGCCAGCACAGAAACCACAGAACCCAGGGAAACCACCAGAAACTGATCTC
CACCGCCACGCTGACTCTGTTCGTGCTCTTTCTGAGCAGCTGGATAGCCT
ATGCGGCGGGCAAGGCCACCGTTCCCGCTCCGCTCGTGGAAGGCGAGACG
GAGTCGGCCACTTCGCAGGACTTTAATAGCAGTAGCGCCTTCCTGGGGGC
CATAGCCTCGGCCTCATCGACGGGATCGGGATCGGGCTCGGGCTCGGGCT
CGGGATCGGGATCGGGATCAGGATCCTATGGCCTGGCCTCGATGAACAGC
AGCCCCATTGCCATAGTCTCGTATCAAGGCATCACCAGCAGCAATTTGGG
CGACAGCAATACGACTTTGGTGCCGCTATCGGACACTCCTTTGCTCCTGG
AGGAATTTGCAGCCGGCGAGTTTGTACTGCCCCCGTTGACGTCCATATTC
GTGAGCATCGTCCTTCTCATCGTGATCCTAGGCACTGTAGTGGGCAATGT
CCTGGTCTGCATAGCCGTTTGCATGGTGCGGAAATTGAGGAGACCCTGCA
ATTACCTTTTGGTGTCCTTGGCTCTTTCGGATCTCTGTGTGGCTCTTCTG
GTGATGCCCATGGCCTTGCTTTATGAAGTGCTGGAGAAGTGGAACTTTGG
ACCGCTGCTCTGCGACATCTGGGTGTCCTTCGATGTGCTGTGCTGCACGG
CCTCGATCCTGAATCTGTGTGCCATATCCG
MXO02319.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:47:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12073-PA | 1695 | 5-HT7-RA | 1..772 | 9..780 | 3860 | 100 | Plus |
CG3856-PB | 1914 | Oamb-RB | 310..344 | 744..778 | 150 | 97.1 | Plus |
CG3856-PA | 1938 | Oamb-RA | 310..344 | 744..778 | 150 | 97.1 | Plus |
CG3856-PC | 1938 | Oamb-RC | 310..344 | 744..778 | 150 | 97.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
5-HT7-RB | 4486 | CG12073-RB | 1144..1915 | 9..780 | 3860 | 100 | Plus |
5-HT7-RA | 3506 | CG12073-RA | 1070..1841 | 9..780 | 3860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30970807..30971578 | 780..9 | 3860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:16:19 has no hits.
MXO02319.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:16 Download gff for
MXO02319.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12073-PA | 1..772 | 9..780 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:26 Download gff for
MXO02319.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
5-HT7-RA | 1070..1841 | 9..780 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:56 Download gff for
MXO02319.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
5-HT7-RA | 1070..1841 | 9..780 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:56 Download gff for
MXO02319.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30970807..30971578 | 9..780 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:26 Download gff for
MXO02319.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26796529..26797300 | 9..780 | 100 | | Minus |