Clone Sequence Records
MXO02324.3prime Sequence
522 bp (522 high quality bases) assembled on 2007-01-19
> MXO02324.3prime
ATGGTCTAGAAAGCTTGCGGACTGCACCTTGCCCTTGGTGGTGAAGGCGA
AGTATGCGAATCCGCCGACCAAGAAGGCGGCCAAAAGCTCAGCCTTGATC
CAGGGACCCTTGTAGGCACCCTTGGTGGGCACGGAAATGTCGAGCAGCGA
CTTCACCGATGAAACCTTGTCGCCATCCCGCTGGGCCTTGCGCACATTGG
CATAGCCATCCTCGTCGAAGAGACGCACCTGAACATTGCCGCTGCTGCCC
TGCTTGATATCCTCCACCCAGCTCACCTGGTACTTGTTGTCGCCCACCTT
GGCCACCGGCACCACCTTGCCGCAGGGGAACTCGGCGAACAGGCTGGCGG
GAGCGGCTCCGCTGCACTGCAGCGTGAACTCGCCCACATGGGCCAGCTGG
GTCAGAATCGTGGCATCCTGGGTGCTGAAAGAGCTCACGGTGGCCTTGCA
GCTACCGTAGACGCCGGACGCACAAACGGCGGCAATCAGGCAAATGGCGA
ACAGTTGACGGGACATGTCGAC
MXO02324.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:48:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9035-PA | 501 | Tapdelta-RA | 1..498 | 516..19 | 2490 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tapdelta-RB | 977 | CG9035-RB | 324..821 | 516..19 | 2490 | 100 | Minus |
| Tapdelta-RA | 805 | CG9035-RA | 152..649 | 516..19 | 2490 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11370456..11370715 | 19..278 | 1300 | 100 | Plus |
| 2R | 25286936 | 2R | 11370767..11371012 | 271..516 | 1230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:04 has no hits.
MXO02324.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:20 Download gff for
MXO02324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9035-PA | 1..501 | 15..516 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:53 Download gff for
MXO02324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tapdelta-RA | 145..653 | 14..522 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:20 Download gff for
MXO02324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tapdelta-RA | 145..653 | 14..522 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:20 Download gff for
MXO02324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11370452..11370713 | 14..276 | 99 | <- | Plus |
| 2R | 11370773..11371017 | 277..522 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:53 Download gff for
MXO02324.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7257957..7258218 | 14..276 | 99 | <- | Plus |
| arm_2R | 7258278..7258522 | 277..522 | 98 | | Plus |
MXO02324.5prime Sequence
522 bp (522 high quality bases) assembled on 2007-01-19
> MXO02324.5prime
CAATCCACATGTCCCGTCAACTGTTCGCCATTTGCCTGATTGCCGCCGTT
TGTGCGTCCGGCGTCTACGGTAGCTGCAAGGCCACCGTGAGCTCTTTCAG
CACCCAGGATGCCACGATTCTGACCCAGCTGGCCCATGTGGGCGAGTTCA
CGCTGCAGTGCAGCGGAGCCGCTCCCGCCAGCCTGTTCGCCGAGTTCCCC
TGCGGCAAGGTGGTGCCGGTGGCCAAGGTGGGCGACAACAAGTACCAGGT
GAGCTGGGTGGAGGATATCAAGCAGGGCAGCAGCGGCAATGTTCAGGTGC
GTCTCTTCGACGAGGATGGCTATGCCAATGTGCGCAAGGCCCAGCGGGAT
GGCGACAAGGTTTCATCGGTGAAGTCGCTGCTCGACATTTCCGTGCCCAC
CAAGGGTGCCTACAAGGGTCCCTGGATCAAGGCTGAGCTTTTGGCCGCCT
TCTTGGTCGGCGGATTCGCATACTTCGCCTTCACCACCAAGGGCAAGGAG
CAGTCCGCAAGCTTTCTAGACC
MXO02324.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:48:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9035-PA | 501 | Tapdelta-RA | 1..498 | 9..506 | 2465 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tapdelta-RB | 977 | CG9035-RB | 324..821 | 9..506 | 2475 | 99.8 | Plus |
| Tapdelta-RA | 805 | CG9035-RA | 152..649 | 9..506 | 2475 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11370456..11370715 | 506..247 | 1285 | 99.6 | Minus |
| 2R | 25286936 | 2R | 11370767..11371012 | 254..9 | 1230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:27:18 has no hits.
MXO02324.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:20 Download gff for
MXO02324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9035-PA | 1..501 | 9..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:29 Download gff for
MXO02324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tapdelta-RA | 144..653 | 1..511 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:33 Download gff for
MXO02324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tapdelta-RA | 144..653 | 1..511 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:33 Download gff for
MXO02324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11370452..11370713 | 249..511 | 98 | <- | Minus |
| 2R | 11370773..11371018 | 1..248 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:29 Download gff for
MXO02324.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7257957..7258218 | 249..511 | 98 | <- | Minus |
| arm_2R | 7258278..7258523 | 1..248 | 98 | | Minus |
