Clone MXO02326 Report

Search the DGRC for MXO02326

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:23
Well:26
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCoprox-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02326.3prime Sequence

633 bp (606 high quality bases) assembled on 2007-01-19

> MXO02326.3prime
ATGGTCTAGAAAGCTTGCGACCCAATCCTTGGGGTTCTTCAGGACCTTCA
TCAGTTTGCCCTCCTCGGACTGGGACTTGGGCTCGTGCATGTACTCCCAG
CGGGCGTGCAGGGGCAGGGACATCAGGATGCTCTCGTACCGGGCTCCAGG
CGTGTATAGACCGAACTTGGTGCCACGATCGTAGATCAAATTGAACTCCA
CGTAGCGCCCGCGGCGCAGCAATTGCCACTGTCGTTCGTTGTTGCCATAC
TCCCGATTTTTGTGCTTTCGTACCAGCGGCACGTAGGAGGGAATCACGGC
CCTGGCGCAGCTTGACACAAAGTTGAAGGCCGCCTCCTGGTTGGGCGAAT
CGATGTCGTCGAAAAAGATTCCGCCAATGCCGCGGCTCTCGTTGCGATGC
TTGATGCGGAAGTAGTCGTCGCACCACTTCTTAAAGCGCGGGTAGTAGGT
GGGATCGTGCTCATCGCAGGCGGACTTCAGCGTCTGGTGGAAGTGGGAGG
CGTCCTTCTCGCAGAGGTAATAGGGCGTCAGATCCGTGCCGCCACCAAAC
CACCACTGCTTCTCCCCCTTGGCAGTTTCCACTTCAAAATAACGATAGTT
GAAGTGAATGGTGGGGACATGGGGATTCCTCGG

MXO02326.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:48:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG3433-PA 1173 Coprox-RA 556..1170 633..19 3075 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:49
Subject Length Description Subject Range Query Range Score Percent Strand
Coprox-RB 1467 CG3433-RB 654..1268 633..19 3075 100 Minus
Coprox-RA 1392 CG3433-RA 654..1268 633..19 3075 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:46
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6965074..6965688 633..19 3075 100 Minus
Blast to na_te.dros performed on 2014-11-28 19:54:48 has no hits.

MXO02326.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:21 Download gff for MXO02326.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3433-PA 556..1173 15..633 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:29 Download gff for MXO02326.3prime
Subject Subject Range Query Range Percent Splice Strand
Coprox-RA 654..1274 12..633 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:35 Download gff for MXO02326.3prime
Subject Subject Range Query Range Percent Splice Strand
Coprox-RA 654..1274 12..633 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:35 Download gff for MXO02326.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6965074..6965694 12..633 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:29 Download gff for MXO02326.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6965074..6965694 12..633 99   Minus