MXO02329.3prime Sequence
585 bp (534 high quality bases) assembled on 2007-01-19
> MXO02329.3prime
ATGGTCTAGAAAGCTTGCGTCCCTATCCTTTTTGCGCTGCGCCTGCTCGC
GTTCTAGCGCCCTCTGCTTGGCCTTCTCGTAGATGGGCATTAGTTGTCCG
TTCTCGCCCAGAATTTTTAAGAGCTCCACGATGAAGGGCAAATAGTTGTG
CTTGCGCCGCACATTCTCCACTTTGTAGCGCTTCTTTTTCTGAATCTCGT
ACTCTATGTACGTGCGCAAGCTACTGATCTCCGCCTGTCGATCCTCCTCA
GTGTCCATAGCATTGGGCGCCGGATTAAGCAGCTTCTCAATCTGCTGTTC
ATAAATGCGCTGCCTGTCCGAGATCAGAGCCATCAGATTGAAGTGGATCT
CGCCGTCGCTGTAGCGCTGCATGCGCTTTTCTTTCCCCCCCCCCACCACA
TCGATCCACTTCTGCTAAAAAAAGATCTCACCAAGATCAATGGGTCCCTC
CCTCAGGCCGTCCAGCTCGTACAGTCTTCCTCCGATGGGCATATAGCCGA
CAAAGTGGTACACGTCATCGTCCTTCTTCTGGTTCTTAATGTCCAGCTCG
AAGAGTGTTGGGCGAACAAAGGAGTTGTGCACCGT
MXO02329.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:49:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3431-PA | 975 | Uch-L3-RA | 613..967 | 378..24 | 1775 | 100 | Minus |
| CG3431-PA | 975 | Uch-L3-RA | 406..567 | 585..424 | 760 | 98.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Uch-L5-RB | 1153 | CG3431-RB | 524..1085 | 585..24 | 2525 | 96.6 | Minus |
| Uch-L5-RA | 1394 | CG3431-RA | 524..1085 | 585..24 | 2525 | 96.6 | Minus |
| Uch-L5R-RA | 1298 | CG1950-RA | 777..835 | 375..317 | 190 | 88.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9475802..9476363 | 24..585 | 2525 | 96.6 | Plus |
| X | 23542271 | X | 12055801..12055859 | 317..375 | 190 | 88.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:20:58 has no hits.
MXO02329.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:25 Download gff for
MXO02329.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3431-PA | 406..975 | 15..585 | 95 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:07 Download gff for
MXO02329.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Uch-L5-RA | 524..1095 | 13..585 | 95 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:52 Download gff for
MXO02329.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Uch-L5-RA | 524..1095 | 13..585 | 95 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:52 Download gff for
MXO02329.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9475792..9476363 | 13..585 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:07 Download gff for
MXO02329.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9468892..9469463 | 13..585 | 95 | | Plus |
