MXO02342.5prime Sequence
641 bp (589 high quality bases) assembled on 2007-01-19
> MXO02342.5prime
CAGTCGACATGGCCGACCTACGGAGTCCCCACAATGGAACCGCTGCCATG
GAGAAGCAAAGCCACAGCCAAACCGGAAGCCACCATCACAACAACAATAA
AGCGCTGGATAAGGAAGCATCGGAGAATGGAAAGCCGGAGAAGAGTGATC
CCATGATATACATAATCTTCGTATCGCTGCTCTTCGACTTACTGGCCTTC
ACCATCATTCTGCCGCTGCTGCCCTCGCTGTTGGAGCACTATCGCCAGAA
CGACAGCTCCGGCTTGTATGCCGTGCTCACGGATCGGGTGCGCTGGTTCC
AGCAGCTCCTGGGCGCCCCGGATCGCTACATATCGGTGCTATTCGGAGGC
TTTCTCGGCTCCATGTTCAGCTTCCTGCAGTTCGTGGCCAGTCCCACTGC
CGGAGGACTCTCGGACTACTACGGACGGAAACCAGTCCTGCTGGCTTGTG
CGAGTGGTATTGCGTTATCCTATCTGATCTGGGCCTGCTCCAGCAACTTT
GCCCTGTTCGTTTTGGCCCGCTTCGTGGGCGGAATTAGCAAGGGCAACAT
ATCCCTGTGCATGTCCGTCATTACGGATGTGTCCAGCGTTAAACCGTGGA
CGCGGATGGCCTTGGGGTGGGCTTCTCGTGGGCTTATTGGG
MXO02342.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:52:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5760-PA | 1434 | rtet-RA | 1..584 | 9..592 | 2820 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rtet-RA | 1722 | CG5760-RA | 162..796 | 9..635 | 2915 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21108607..21109050 | 9..452 | 2160 | 99.1 | Plus |
| 3R | 32079331 | 3R | 21109246..21109386 | 452..592 | 705 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:20:04 has no hits.
MXO02342.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:32 Download gff for
MXO02342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5760-PA | 1..627 | 9..628 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:49 Download gff for
MXO02342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rtet-RA | 154..788 | 1..628 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:28 Download gff for
MXO02342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rtet-RA | 154..788 | 1..628 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:28 Download gff for
MXO02342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21108599..21109050 | 1..452 | 98 | -> | Plus |
| 3R | 21109247..21109429 | 453..628 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:49 Download gff for
MXO02342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16934321..16934772 | 1..452 | 98 | -> | Plus |
| arm_3R | 16934969..16935151 | 453..628 | 96 | | Plus |
