MXO02345.3prime Sequence
380 bp (364 high quality bases) assembled on 2007-01-19
> MXO02345.3prime
ATGGTCTAGAAAGCTTGCGACCATGGAGGCTCCCTGTTGGTTGGTTCGCT
GGTTGATCTTCACGTGCGTCTGCCGCTTCTTTTCCTCCTTGAAGGCCTCC
GTGTTGGCCTTCTTTTCGATGCGACGCTCGTTGCGATAGTCCTTCAGCAG
GCGCTTCCGCTCCTTTTTCTCTTCGTGGGTCTCGTCCTTGGGTCTAATGG
ACAGAACGCTTAATGTGGAGAGCACCGATTTGGCGCACAGTGACTTCGGC
CCAGTGGCAGCGGGTGATTCATCGGCCAAATTAGCAAGCGCCTTGGCTGT
CAGTTGGCCATCGACCCCACCACGCAGGACATTCGTGGGCACGCCTGTCT
TCGGGTCGATCTGAATGGGAGCTGGATTTG
MXO02345.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:52:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7686-PA | 1482 | CG7686-RA | 1118..1475 | 380..23 | 1765 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7686-RB | 2099 | CG7686-RB | 1196..1557 | 380..19 | 1780 | 99.4 | Minus |
| CG7686-RA | 1660 | CG7686-RA | 1196..1557 | 380..19 | 1780 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10837112..10837473 | 19..380 | 1780 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:55:25 has no hits.
MXO02345.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:33 Download gff for
MXO02345.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-PA | 1118..1482 | 18..380 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:53 Download gff for
MXO02345.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 1196..1563 | 11..380 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:57 Download gff for
MXO02345.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 1196..1563 | 11..380 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:57 Download gff for
MXO02345.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10837106..10837473 | 11..380 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:53 Download gff for
MXO02345.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6724611..6724978 | 11..380 | 98 | | Plus |
MXO02345.5prime Sequence
831 bp (771 high quality bases) assembled on 2007-01-19
> MXO02345.5prime
CAGTCGACATGGTTAAGGGCAAGAAACCGTACATTGACCGCAAGAAGGCG
GTCACCTTCCATTTGGTGCACCGCAGTCAACACGATCCCCTGGTGACCGA
TGAAAATGCTCCACAGAGGGTGCTCCTCGAGGCAGCGGCGCGCCAGCAAA
AGCCGAAGGATCCAGAGCCACCCACCGATCCCGCCCAACGGCAGGAGGAG
CTGAAGAAGTTTGGTATTCACTTCGACGATGACTATGATTACATGCAGCA
TCTGAAGAAACGTGAAAACGACGTGGTTTGGGAGTTCATGGAGAATCCCA
ATCAAGCGAGAAAGCAGAAAGTCCAGGATAGTGAGAAACCGGGCCCTGCG
CCCAAGCTTATGCTGCCCAGCTCGGTGTTCGCTAGCGAGTTTGAGGAATC
CGAGGGCATGCTAAACAAGGCGGCTCCTCAAACCTTGCGTCTCGACTGGG
ATCCCGATGTGGTCGCCGCCCTGGACAGCGATTGTGAGAACGAAGAGCTG
GAAGATGACTTCGTAATCCAGGCCATGGCCGAGGGCGACTCCGACGACGA
GGAATGGGATGACGAAGATGGGGAGGAGCAATCTGACATGGACTTCGATT
CCGATGACCTAAACGAGGATGAAAATGAGGACGAACTAATGGACCGTTTG
GCACCCCTGATGCGCGAACGTCGCTTTGACGACGAAGAGGTCAAGTCGCG
CTTCACCGAGTACTCCATGTCCTCCAGCGTAATTCGGCGCAATGAGCAGC
TGTCCCTATTGGACGATCGCTTCGAGAAGTTTTACGCCACATACGATGAT
CCGGAACTGGGCGACTTGGCTCTCGAGGACA
MXO02345.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:52:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7686-PA | 1482 | CG7686-RA | 1..823 | 9..831 | 4115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7686-RB | 2099 | CG7686-RB | 79..901 | 9..831 | 4115 | 100 | Plus |
| CG7686-RA | 1660 | CG7686-RA | 79..901 | 9..831 | 4115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10837768..10838588 | 831..11 | 4105 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:46:28 has no hits.
MXO02345.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:34 Download gff for
MXO02345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-PA | 1..822 | 9..830 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:35 Download gff for
MXO02345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 74..900 | 1..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:18 Download gff for
MXO02345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7686-RA | 74..900 | 1..830 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:18 Download gff for
MXO02345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10837769..10838595 | 1..830 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:35 Download gff for
MXO02345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6725274..6726100 | 1..830 | 99 | | Minus |
