MXO02355.3prime Sequence
796 bp (669 high quality bases) assembled on 2007-01-19
> MXO02355.3prime
ATGGTCTAGAAAGCTTGCATCGAATGTTGTCCAGTTGTTCATGCCCTTTC
CGGTGGTGAGCTGCTGCGACTTCTCCGTTCCGTTGGCGTTCAGGGTGAAC
TGGTCCAGGCCGTACTTGCGGAGCAGCTCGAAGTCGTCGTCGGGCTTGGC
GGCAATGGTGTTGCGCTGGATCTGCGGCGGTGGGTGCATCGGTGGCGTCC
GTCCCGTCACAGCTGCCACCGTGGCCATGTGCTTGGGCGCGAAATACGGG
TACAGTGGATTGCTGACGCTACTGGCCACCACACTGCTGTTGACGCCAGC
GGGCAGTGTGCTGCACTTCTTGGCAAATGCCGTGCTGAGCGGCGGCAACG
GACGAGCATTCTGATTGAGCGGATCGAAGTCCTCCAGGTCGAAGCTGGTG
TTGTTGCTATCGTCCAGCGATATCAGATCATTCATGCTGTCCTCCAGTGG
CTGCTGTTGCTCTCTCTTGGCCCGCGGTGTCGGAATGGGCGGATCAGACA
CATTAAGATGCGAGAACGTCGACGCCGCCGTCACAAACGATGCGCCCGAG
GAGGATGAGGTCGCCGATGACGAGGATGCATTCGAGCTGCGTACAGAATC
ATTTCCGGGCTCGTCCTTCCAGCAGTTACGTTCCAGTTTGCTAATCTCTG
CACTGACGGCTGCAGCCGTGGCCGCCACAATCGCATTCGAGCTGCCCTGC
CTCCGGGGCGGAATCGGTGGAGATTGTACGTCCGGCGGACTATCAAAGCT
GCTGGAATCGGCGGTAGGCAGGGGCTGACGCGGTCTGGTGGGCGTG
MXO02355.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:55:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18659-PA | 2727 | CG18659-RA | 1947..2724 | 796..19 | 3890 | 100 | Minus |
CG18659-PB | 1500 | CG18659-RB | 720..1497 | 796..19 | 3890 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18659-RH | 3759 | CG18659-RH | 2581..3358 | 796..19 | 3890 | 100 | Minus |
CG18659-RF | 3816 | CG18659-RF | 2638..3415 | 796..19 | 3890 | 100 | Minus |
CG18659-RE | 3655 | CG18659-RE | 2477..3254 | 796..19 | 3890 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9123705..9124147 | 19..461 | 2215 | 100 | Plus |
2R | 25286936 | 2R | 9124734..9125080 | 450..796 | 1690 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:46:59 has no hits.
MXO02355.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:41 Download gff for
MXO02355.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18659-PB | 720..1500 | 16..796 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:04 Download gff for
MXO02355.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18659-RE | 2477..3259 | 14..796 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:52 Download gff for
MXO02355.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18659-RE | 2477..3259 | 14..796 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:52 Download gff for
MXO02355.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9124744..9125080 | 460..796 | 100 | | Plus |
2R | 9123700..9124145 | 14..459 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:04 Download gff for
MXO02355.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5011205..5011650 | 14..459 | 99 | <- | Plus |
arm_2R | 5012249..5012585 | 460..796 | 100 | | Plus |
MXO02355.5prime Sequence
700 bp (698 high quality bases) assembled on 2007-01-19
> MXO02355.5prime
CAGTCGACATGTTCATTCCCACACACCTTATTTGCAATACTAATCCGGCT
GTAAAGTCTGCCGTCAAATCGGTTAAGGAGGGCTCGCGGGGCATGAAGAC
CGCCTATAAGGGATTCAAGACAAAGCTGCGCGAGAACGGAAACCAGTTTG
GTGGCACGCACTTCCACTTTGGACTTGGCTCCCCGAATCATTCGGATCGT
CCTGACGGCACCAGCGGAGGATACGTTCGTGGTGGCAAGGCCATCGGGGC
TGCACACCACTCGGCGCCCAGTTCTCCAGTGACCAGCAAGCGTCTTGATG
GAATTGCCTCCGTCACGGGAAGCAGCGGCAGCGGTGGATCCGGCGCCAGG
GAGCCGCGGGAGTTCCTGCGACGCGGTCCCGTCCCGCTGGCCATGTCTAG
CTCGAGCAGCCACATTCAGCCGAACGGCCATGCGTACGGTGCGAGTGCTG
GTGCTCATTATGGTCATCATCTCGCTGCGTCTCCTGCTGTTAGCTCGGCG
AGCTCGCTCTGCTCATCTTCGGAGATGAACCTGTCGCAGGAACTGCAGAA
CCATCCGCTTTTCAAGACGCCGGCAGTGGACCGCAGCCTTAAGCCAAACG
CAGAGCACAGGCGAGGAGCAGCACCGCCAGCCCGTCCACCGCCACCGCAA
TCTACGCCCGCCTCCTACTACAATCATCCCTATGCCGCGCATCCGCACGT
MXO02355.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:55:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18659-PB | 1500 | CG18659-RB | 1..692 | 9..700 | 3460 | 100 | Plus |
CG18659-PA | 2727 | CG18659-RA | 1258..1919 | 39..700 | 3310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18659-RE | 3655 | CG18659-RE | 1758..2449 | 9..700 | 3460 | 100 | Plus |
CG18659-RI | 3513 | CG18659-RI | 1648..2313 | 35..700 | 3315 | 99.8 | Plus |
CG18659-RA | 3519 | CG18659-RA | 1648..2313 | 35..700 | 3315 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9125551..9126067 | 587..71 | 2585 | 100 | Minus |
2R | 25286936 | 2R | 9125108..9125220 | 700..588 | 565 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:46:00 has no hits.
MXO02355.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:42 Download gff for
MXO02355.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18659-PB | 1..692 | 9..700 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:52 Download gff for
MXO02355.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18659-RE | 1750..2449 | 1..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:34 Download gff for
MXO02355.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18659-RE | 1750..2449 | 1..700 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:34 Download gff for
MXO02355.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9126181..9126213 | 39..71 | 100 | <- | Minus |
2R | 9127027..9127062 | 1..38 | 92 | | Minus |
2R | 9125108..9125220 | 588..700 | 100 | <- | Minus |
2R | 9125551..9126066 | 72..587 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:52 Download gff for
MXO02355.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5012613..5012725 | 588..700 | 100 | <- | Minus |
arm_2R | 5013056..5013571 | 72..587 | 100 | <- | Minus |
arm_2R | 5013686..5013718 | 39..71 | 100 | <- | Minus |
arm_2R | 5014532..5014567 | 1..38 | 92 | | Minus |