MXO02357.3prime Sequence
740 bp (733 high quality bases) assembled on 2007-01-19
> MXO02357.3prime
CTTAAAGCGCCCGCCAAACGAAGGGNCNAGAAAGCTTGCCACCTTTCAAG
TTAGTTCGGGCACGGCCTTGAAAAGATCTGCCACGATGCCAATATCGGCG
ACCTGGAAGATGGGCGCTCCGGGATCCTTGTTGATGGCCACAATCGTCTT
GGAGTCCTTCATGCCAGCCAAGTGCTGGATGGCGCCTGAGATTCCGACAG
CGATGTACAGCTCGGGAGCCACAATCTTGCCGGTCTGACCGATCTGCAGA
TCATTGGGCACAAATCCAGCATCTTCGGCAGCACGAGAGGCACCCACAGC
GGCACCAAACTTATCGGCCAGATCATACAGCAGCTTGAAGTTATCTTTTT
TTTTCAGGCCCCGCCCCCCGGACACAATAACCGGGGCTCCGGCCAGCTCG
TTTCTTTCCCCCCCCCCCCAGNNNNNGGGANANNAATAAAAAAAGAAGGG
GGGNGAAGNNANNAGNNGGNGNNGGNNNNANGGNNNNANNNNNANNGNNG
GNGGNNGNNGGNGGGAAANNGGNGNNNNNNANGGNGANNANNNNAANGGN
GNNNNGGGANNNNAGGGNGAGGANAGNANNNNNGGNGNAGAAAGNGNGNA
NAAAGGGGNNGNNNGAANNAANANNGANGAANNNNGAAAAGGGNGAAANA
NNNAGNNGGGNNGNNANGGGGGGAAGNANGNANNGGNNGAAAGNAGAAGN
AAAGGGNAGGAGGGGGGGGAANNNGAANGGAGAAGGGGGG
MXO02357.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:55:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8996-PA | 993 | wal-RA | 684..980 | 346..50 | 1410 | 98.9 | Minus |
CG8996-PB | 993 | wal-RB | 684..980 | 346..50 | 1410 | 98.9 | Minus |
CG8996-PA | 993 | wal-RA | 630..677 | 400..353 | 140 | 91.6 | Minus |
CG8996-PB | 993 | wal-RB | 630..677 | 400..353 | 140 | 91.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wal-RB | 1579 | CG8996-RB | 706..1063 | 400..43 | 1565 | 95.8 | Minus |
wal-RA | 1212 | CG8996-RA | 706..1063 | 400..43 | 1565 | 95.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11689085..11689442 | 43..400 | 1565 | 95.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:32:22 has no hits.
MXO02357.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:43 Download gff for
MXO02357.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8996-PB | 630..993 | 36..400 | 95 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:27 Download gff for
MXO02357.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wal-RA | 706..1070 | 35..400 | 95 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:54 Download gff for
MXO02357.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wal-RA | 706..1070 | 35..400 | 95 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:54 Download gff for
MXO02357.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11689078..11689438 | 35..396 | 95 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:27 Download gff for
MXO02357.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7576583..7576943 | 35..396 | 95 | <- | Plus |
MXO02357.5prime Sequence
769 bp (730 high quality bases) assembled on 2007-01-19
> MXO02357.5prime
CAGTCGACATGTTCGCCAGCAACACGCGTAATCTTATGCGCAGCAGCATT
TTGCAGCGATGCAAGAGCACTTTGGTGGTGGCTGAGCACAACAATGAGGT
ACTCAATCCGATCACCCTGAACACCATCTCTGCGGCCAAGAAGATCGGTG
GTGACGTCACAGTTCTGGTGGCAGGCACAAAATGCGGACCCGCTTCCGAG
GCTCTTTCCAAGGTGGATGGCGTGACCAAGGTTCTGGTGGCCGAAAATGC
CGCCTTCAACGGATTTACCGCGGAGTCGCTGACCCCATTGGTCCTGGCCG
CCCAGTCTCAGTTCAAGTTCACCCACATCCTGGCCGGAGCTTCGGCTTTC
GGCAAAAACGTGCTGCCACGCGTGGCGGCCAAGCTGGATGTGTCGCCCAT
TTCGGAGATCATCGATGTTAAGTCGGACGACACCTTTGTGCGCACTATCT
ACGCCGGAAATGCTATCCTCACCCTGAAATCCAAGGACGCCGTTAAGGTG
ATCACCGTAAGGAGCACCAATTTCCCACCGGCAGCCACCAGCGGTGGAAG
TGGAGCCGTGGAGCAGGCACCAGCTGGTGACTTCGCCAGCAGCCTGTCCG
AATTTGTATCCCAGGAGCTGACCAAGTCCGATCGCCCCGAGCTGGCCGGA
GCCAAGGTTATTGTGTCCGGAGGACGGGGCCTGAAGTCCGGAGATAACTT
CAAGCTGCTGTATGATCTGGCCGATAAGTTTGGTGCCGCTGTGGGTGCCT
CTCGTGCTGCCGTGGATGC
MXO02357.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:55:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8996-PA | 993 | wal-RA | 1..761 | 9..769 | 3805 | 100 | Plus |
CG8996-PB | 993 | wal-RB | 1..761 | 9..769 | 3805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wal-RB | 1579 | CG8996-RB | 77..837 | 9..769 | 3805 | 100 | Plus |
wal-RA | 1212 | CG8996-RA | 77..837 | 9..769 | 3805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11689311..11689888 | 769..192 | 2890 | 100 | Minus |
2R | 25286936 | 2R | 11690445..11690586 | 192..51 | 710 | 100 | Minus |
2R | 25286936 | 2R | 11690678..11690719 | 50..9 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:26:28 has no hits.
MXO02357.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:43 Download gff for
MXO02357.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8996-PB | 1..761 | 9..769 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:52 Download gff for
MXO02357.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wal-RA | 69..837 | 1..769 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:03 Download gff for
MXO02357.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wal-RA | 69..837 | 1..769 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:03 Download gff for
MXO02357.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11689311..11689888 | 192..769 | 100 | <- | Minus |
2R | 11690446..11690586 | 51..191 | 100 | <- | Minus |
2R | 11690678..11690727 | 1..50 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:52 Download gff for
MXO02357.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7577951..7578091 | 51..191 | 100 | <- | Minus |
arm_2R | 7578183..7578232 | 1..50 | 92 | | Minus |
arm_2R | 7576816..7577393 | 192..769 | 100 | <- | Minus |