MXO02358.3prime Sequence
459 bp (459 high quality bases) assembled on 2007-01-19
> MXO02358.3prime
ATGGTCTAGAAAGCTTGCCTTTTTACCGGGAGGTGCTATTGGTTGGCCGC
GCTCCTTGCCGCGCAGCTTAATGCCGAGAACGCGTTCCATTTTACCCAGA
ATCAAGTTGTTTGGAATACCGCGACCGGCCTCGTAGTCGGTTACCACTTG
CTGCTTTTCGCAGATTTTAGTTGCCAGGTCCTTTTGGCTGAGGCCCTTGC
TCTGTCGTCCCTGCTGGATGAGCTTGCCCACATCGAGGGGAATCTTGTCG
TGGCGCAGCTCCTCGGTCTCGCGGTCTAGTTTGGCAGTGTTCTTGGTGGT
CACATGCTGCTTGTTGGTGCCAGCACCATACTTCTGTTGGGTATCCACGG
CGACTCCTTGACGGCGTGCCTGGTTGACCGCCGACTCCGTCTTGAGGGTC
GACGATTTCGGTGCTTTCTTCCGAAGAACAGTCACAGAGTCCCAGTCCGA
CATGTCGAC
MXO02358.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:55:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4143-PA | 438 | mbf1-RA | 1..435 | 453..19 | 2150 | 99.7 | Minus |
CG4143-PB | 438 | mbf1-RB | 1..435 | 453..19 | 2150 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mbf1-RC | 1225 | CG4143-RC | 249..683 | 453..19 | 2160 | 99.8 | Minus |
mbf1-RB | 1648 | CG4143-RB | 209..643 | 453..19 | 2160 | 99.8 | Minus |
mbf1-RA | 1085 | CG4143-RA | 109..543 | 453..19 | 2160 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16575187..16575347 | 329..169 | 805 | 100 | Minus |
3L | 28110227 | 3L | 16575717..16575866 | 168..19 | 750 | 100 | Minus |
3L | 28110227 | 3L | 16574853..16574976 | 453..330 | 605 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:32:11 has no hits.
MXO02358.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:44 Download gff for
MXO02358.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4143-PB | 1..438 | 16..453 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:04 Download gff for
MXO02358.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mbf1-RA | 103..547 | 15..459 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:46 Download gff for
MXO02358.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mbf1-RA | 103..547 | 15..459 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:46 Download gff for
MXO02358.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16574853..16574976 | 330..453 | 99 | -> | Minus |
3L | 16575187..16575347 | 169..329 | 100 | -> | Minus |
3L | 16575717..16575870 | 15..168 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:04 Download gff for
MXO02358.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16567953..16568076 | 330..453 | 99 | -> | Minus |
arm_3L | 16568287..16568447 | 169..329 | 100 | -> | Minus |
arm_3L | 16568817..16568970 | 15..168 | 98 | | Minus |
MXO02358.5prime Sequence
459 bp (459 high quality bases) assembled on 2007-01-19
> MXO02358.5prime
CAGTCGACATGTCGGACTGGGACTCTGTGACTGTTCTTCGGAAGAAAGCA
CCGAAATCGTCGACCCTCAAGACGGAATCGGCGGTCAACCAGGCACGCCG
TCAAGGAGTCGCCGTGGATACCCAACAGAAGTATGGTGCTGGCACCAACA
AGCAGCATGTGACCACCAAGAACACTGCCAAACTAGACCGCGAGACCGAG
GAGCTGCGCCACGACAAGATTCCCCTCGATGTGGGCAAGCTCATCCAGCA
GGGACGACAGAGCAAGGGCCTCAGCCAAAAGGACCTGGCAACTAAAATCT
GCGAAAAGCAGCAAGTGGTAACCGACTACGAGGCCGGTCGCGGTATTCCA
AACAACTTGATTCTGGGTAAAATGGAACGCGTTCTCGGCATTAAGCTGCG
CGGCAAGGAGCGCGGCCAACCAATAGCACCTCCCGGTAAAAAGGCAAGCT
TTCTAGACC
MXO02358.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:56:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4143-PA | 438 | mbf1-RA | 1..435 | 9..443 | 2175 | 100 | Plus |
CG4143-PB | 438 | mbf1-RB | 1..435 | 9..443 | 2175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mbf1-RC | 1225 | CG4143-RC | 249..683 | 9..443 | 2175 | 100 | Plus |
mbf1-RB | 1648 | CG4143-RB | 209..643 | 9..443 | 2175 | 100 | Plus |
mbf1-RA | 1085 | CG4143-RA | 109..543 | 9..443 | 2175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16575187..16575347 | 133..293 | 805 | 100 | Plus |
3L | 28110227 | 3L | 16575717..16575866 | 294..443 | 750 | 100 | Plus |
3L | 28110227 | 3L | 16574853..16574976 | 9..132 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:21:25 has no hits.
MXO02358.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:44 Download gff for
MXO02358.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4143-PB | 1..438 | 9..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:15 Download gff for
MXO02358.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mbf1-RA | 101..547 | 1..447 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:07 Download gff for
MXO02358.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mbf1-RA | 101..547 | 1..447 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:07 Download gff for
MXO02358.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16574853..16574976 | 9..132 | 100 | -> | Plus |
3L | 16575187..16575347 | 133..293 | 100 | -> | Plus |
3L | 16575717..16575870 | 294..447 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:15 Download gff for
MXO02358.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16568817..16568970 | 294..447 | 98 | | Plus |
arm_3L | 16567953..16568076 | 9..132 | 100 | -> | Plus |
arm_3L | 16568287..16568447 | 133..293 | 100 | -> | Plus |