MXO02362.3prime Sequence
735 bp (660 high quality bases) assembled on 2007-01-19
> MXO02362.3prime
ATGGTCTAGAAAGCTTGCACTTTTGCGCTCGGAGTTCTTTAGCTCTGCTA
AGTACCAAGTGAAAGTTGGAAATTGTTTGATGCTGTAGATAGAATACTTT
ATCGAGTTGATTCCATCCTGTTCTATTTTGCTCATGCCATTCTGTAAGTT
TTCATAGCGCTTAGGATTGGCCTTTTCCTTCTGATGCTTCAGCATCTTGT
AGCGAGCTATGTTGACCGGATACCTTGATATGAATAGGTTTGCGTGCTTC
AACCTGTTGGACATGTCGTCATCCTCGCCGCCCCAGCCAAAGAACGAGTT
TGAGAACCCATTTACGGCCTGAAAGTGCTCACGCGTCATTGCGGAAACAC
CTCCAAATATTGATCGATAAGGCAACCTGAAGTTCAGCGTGTCTATAGCC
ACTGACATGTGTCGCGGCTGACGTGGACAGTTGTAAAGATTGCGGTCGTC
CAAAGGCAGAAGATCGACATCGTGGAATATAAAACAATCCCACTGGTACA
GCTTTAAGGCCTCCAAATAACCAATGTTCATCATGGCAGCCCGATTAAAG
GGCTTCCCGTTGGTCTGCTCTACAATGAAAATGCGATAGGCGATGCGCTG
CTTCATCAGAAATGGGTGGATGTTGCGCANGAAAAGTAATAGATGGGCGT
ATCGATCGCGGAAGGGCACAACAATAGCCACGTGATGCTGGGCATTGCAG
TTTTCAGGCTCGAAGGCGCCACCAGGGCGCAAAAG
MXO02362.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:56:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8536-PA | 1212 | beta4GalNAcTA-RA | 493..1209 | 735..19 | 3566 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
beta4GalNAcTA-RA | 1867 | CG8536-RA | 627..1343 | 735..19 | 3574 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14259781..14260140 | 735..376 | 1789 | 99.7 | Minus |
2R | 25286936 | 2R | 14260195..14260415 | 378..158 | 1105 | 100 | Minus |
2R | 25286936 | 2R | 14260487..14260626 | 158..19 | 700 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:32:28 has no hits.
MXO02362.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:47 Download gff for
MXO02362.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8536-PA | 493..1212 | 18..735 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:14 Download gff for
MXO02362.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
beta4GalNAcTA-RA | 627..1347 | 13..735 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:56 Download gff for
MXO02362.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
beta4GalNAcTA-RA | 627..1347 | 13..735 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:56 Download gff for
MXO02362.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14259781..14260139 | 377..735 | 99 | -> | Minus |
2R | 14260197..14260415 | 158..376 | 100 | -> | Minus |
2R | 14260488..14260630 | 13..157 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:14 Download gff for
MXO02362.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10147286..10147644 | 377..735 | 99 | -> | Minus |
arm_2R | 10147702..10147920 | 158..376 | 100 | -> | Minus |
arm_2R | 10147993..10148135 | 13..157 | 97 | | Minus |
MXO02362.5prime Sequence
815 bp (741 high quality bases) assembled on 2007-01-19
> MXO02362.5prime
CAGTCGACATGTACCTCTTCACCAAGGCGAATCTCATACGCTTCCTAGCC
GGCGCGATATGCTTGTTGCTGGTGCTTAACTTTGTGGGCTTCCGTTCCGA
CGGAGGTAGCGCCACCTCCCTCAGCAAGCTCAGCATTCGGCGCGTGCACA
AGTATGCTCATATCTACGGGAACGCTAGCAGCGATGGAGCCGGAGGCAGT
GAAGCATCCAGGCTGCCCGCTTCCCCGCTCGCCTTATCAAAAGACAGAGA
GCGGGACCAGGAGCTCAATGGCGGACCCAACTCTACCATAAGAACTGTGA
TTGCCACGGCAAACTTTACTTCCATTCCACAAGACTTAACGCGCTTCCTG
CTGGGCACAAAGAAATTTTTGCCCCCGCGACAGAAATCCACATCCGCCCT
CCTTGCCAACTGCACTGATCCCGATCCCCGTGATGGTGGACCCATCACGC
CCAACACGACACTGGAGTCACTGGACGTTATTGAGGCGGAGCTTGGACCT
CTTTTGCGCCCTGGTGGCGCCTTCGAGCCTGAAAACTGCAATGCCCAGCA
TCACGTGGCTATTGTTGTGCCCTTCCGCGATCGATACGCCCATCTATTAC
TTTTCCTGCGCAACATCCACCCATTTCTGATGAAGCAGCGCATCGCCTAT
CGCATTTTCATTGTAGAGCAGACCAACGGGAAGCCCTTTAATCGGGCTGC
CATGATGAACATTGGTTATTTGGAGGCCTTAAAGCTGTACCAGTGGGATT
GTTTTATATTCCACCATGTCGATCTTCTGCCTTTGGACGACCGCAATCTT
TCCAACTGTCCACGT
MXO02362.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:57:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8536-PA | 1212 | beta4GalNAcTA-RA | 1..807 | 9..815 | 3985 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
beta4GalNAcTA-RA | 1867 | CG8536-RA | 134..941 | 8..815 | 4010 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14259715..14260095 | 435..815 | 1875 | 99.5 | Plus |
2R | 25286936 | 2R | 14259355..14259660 | 132..437 | 1530 | 100 | Plus |
2R | 25286936 | 2R | 14259163..14259288 | 8..133 | 630 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:32 has no hits.
MXO02362.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:47 Download gff for
MXO02362.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8536-PA | 1..807 | 9..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:00 Download gff for
MXO02362.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
beta4GalNAcTA-RA | 126..941 | 1..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:34 Download gff for
MXO02362.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
beta4GalNAcTA-RA | 126..941 | 1..815 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:34 Download gff for
MXO02362.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14259155..14259288 | 1..133 | 97 | -> | Plus |
2R | 14259357..14259658 | 134..435 | 100 | -> | Plus |
2R | 14259716..14260095 | 436..815 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:00 Download gff for
MXO02362.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10146660..10146793 | 1..133 | 97 | -> | Plus |
arm_2R | 10146862..10147163 | 134..435 | 100 | -> | Plus |
arm_2R | 10147221..10147600 | 436..815 | 99 | | Plus |