MXO02363.3prime Sequence
402 bp (339 high quality bases) assembled on 2007-01-19
> MXO02363.3prime
ATGGTCTAGAAAGCTTGCGTACCGTCGTCGGTCACGCTCTCCTCGCGAGT
CCCGTTCCCGCTGGTCGTGACGGCCACGGTCACGTTCTCGCTCTCGTTCC
CTATCCCGGCGATCTCTGTCGCCGTCCCTCTCGCGCTCCCTGATACTGTC
GCGATCTTGGCGCTCTCGTTCGCGATCGTGGCGTCCATTGTTTTGCCGAC
GGTCATAGTCCTCGTTGTGGGTGTCCCGATTGCGCACCCTATTTCGCTGG
CGGTCGTAGTCTTCCAGTTCGTCGTAGTAATCCCGGGAACGGGCGCTGTT
GCCCTGCCCAGATCTTCGCTCGCGCTCCCGACTGCGGGACCTTGACTTGG
AGCGAAGGCTCCGAGGACGTCTCACTGCTGTCCACCCCCCCCCAGGCCGG
TT
MXO02363.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:57:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30342-PA | 993 | CG30342-RA | 627..986 | 382..23 | 1700 | 98.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:34:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prp38-RA | 1196 | CG30342-RA | 799..1162 | 382..19 | 1745 | 98.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:33:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9144754..9145117 | 382..19 | 1745 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:34:00 has no hits.
MXO02363.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:48 Download gff for
MXO02363.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30342-PA | 627..993 | 15..382 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:37:29 Download gff for
MXO02363.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp38-RA | 799..1169 | 11..382 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:39 Download gff for
MXO02363.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp38-RA | 799..1169 | 11..382 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:39 Download gff for
MXO02363.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9144754..9145124 | 11..382 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:37:29 Download gff for
MXO02363.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5032259..5032629 | 11..382 | 97 | | Minus |
MXO02363.5prime Sequence
712 bp (647 high quality bases) assembled on 2007-01-19
> MXO02363.5prime
CAGTCGACATGGCCAACCGCACGGTGAAGGAGGCCAAAAACGTGCACGGC
ACCAATCCGCAGTACCTCATCGAGAAGATCATCCGTTCGAGGATATACGA
CTCTAAGTACTGGAAGGAGCAATGCTTTGCTCTCACTGCGGAGCTTCTGG
TGGACAAGGCAATGGAGCTGCGATTCGTCGGAGGCGTCTACGGCGGCAAC
ATCAAGCCCACCCAGTTCCTCTGCCTCACACTCAAGATGCTGCAGATTCA
GCCGGAAAAGGACATCGTAGTGGAGTTTATCAAGAACGAGGAGTTCAAGT
ACGTTCGAGCATTGGGAGCCTTCTATCTACGGCTCACAGGAGCTGCCCTG
GACTGCTACAAGTACCTGGAGCCGTTGTACATAGACAATCGAAAGCTGCG
CCGCCAGAATCGCGCCGGCCAGTTCGAGATTGTCTACATGGATGAGTACA
TTGACGAACTGCTGCGCAACGACCGTGTCTGCGACATTATACTGCCCCGC
ATCCAGAAGCGCTCCATTCTCGAGGAAAACAACGAAATCGAGCCCAAGGT
GTCAGTGCTGGATGAGGACTTGGACGACGAACTGCCCAGCGACGAGGAGA
AGGCAGACGAGACCAACCGGCCTAAGGAGAATTCGACAGCAGTGAGACGA
CCACGGAGAGTTCGCTCCAAGTCAAGGTCCCGCAGTCGGGAGCGCGAGCG
AAAATCTGGGCA
MXO02363.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:57:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30342-PA | 993 | CG30342-RA | 1..704 | 9..712 | 3495 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prp38-RA | 1196 | CG30342-RA | 173..876 | 9..712 | 3505 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9144128..9144831 | 9..712 | 3505 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:46:03 has no hits.
MXO02363.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:48 Download gff for
MXO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30342-PA | 1..703 | 9..711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:54 Download gff for
MXO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp38-RA | 173..875 | 9..711 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:36 Download gff for
MXO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp38-RA | 173..875 | 9..711 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:36 Download gff for
MXO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9144128..9144830 | 9..711 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:54 Download gff for
MXO02363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5031633..5032335 | 9..711 | 99 | | Plus |
