MXO02364.3prime Sequence
741 bp (713 high quality bases) assembled on 2007-01-19
> MXO02364.3prime
ATGGTCTAGAAAGCTTGCTTCATCGATCTCTCCCAGATACAAAGTCTTAT
CGCTGGATCCAGATAGAATCAGGGGTTCTTTTGGGCTGAAATCCACGGCA
TTGACACTGCCATTGTGTCCGGGCAGCTTGTAAAGAATTCTCCTTGTATT
TACATCCCAAATATAGACATGCCGATCGGCGGAACCCGATGTTATTTTAT
CGCTTCCCGGCGACCAAGCGCATCTCAGCAGATTCTTCTCAAAATTGTGC
TGATGGCCTTGGAATACCTTCACACATCTTTCCCCGGGTGCATAAGGTCT
CACGTCCCACACCCTCAAGGTGTTATCCATGGCATTTGTCAAGATAAAGT
CTCCTTCGGGGGACAAGGACATTCCGGTAATCGTATCCGAATGCCCTCGC
AGATGGTGCAAGACAGCCTGTTTTCGAATGTCCCAGATTTTGACTTCGTT
GTCGATCCCGCCGCTAATTACTTGTTCTCCAGTGTCACCAAAACAAACAG
CTGTGACTTGAAAAGGGGATTCCAAAGTGTGTGCCGCGTGTTTTTTCCTG
GCGTCCCAGATTTTTATGGTGCGATCATCGCTTCCCGAGCAGAGGAGCTG
TTGACCCCTACGCGAGCCCTGAACGCTGTTCACGAAGTTGCCATGCCCCT
TGAACCGCCGTTGCCGCTGGCCCGTGGCTATGTCCCAAAAGGCCAGAGTT
TTATCAGTGGAGCAGGTAAAAATGTGCGATCCATCCGGCGT
MXO02364.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:57:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3436-PA | 1044 | CG3436-RA | 319..1041 | 741..19 | 3615 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3436-RC | 1381 | CG3436-RC | 531..1253 | 741..19 | 3615 | 100 | Minus |
CG3436-RA | 1261 | CG3436-RA | 411..1133 | 741..19 | 3615 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 156816..157538 | 741..19 | 3615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:55:54 has no hits.
MXO02364.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:49 Download gff for
MXO02364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3436-PA | 319..1044 | 16..741 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:09 Download gff for
MXO02364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3436-RA | 411..1133 | 19..741 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:15 Download gff for
MXO02364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3436-RA | 411..1133 | 19..741 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:15 Download gff for
MXO02364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 156816..157538 | 19..741 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:09 Download gff for
MXO02364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 156816..157538 | 19..741 | 100 | | Minus |
MXO02364.5prime Sequence
828 bp (785 high quality bases) assembled on 2007-01-19
> MXO02364.5prime
CAGTCGACATGGGTACCAAAAGACCCAATAATAGCGTAATTTTGGCCCAA
GAGGCAAAGCGTAGCAAAAATGATCTGATGGCCTACACAAACAGGGACAA
AGCGCTCCTTGAATCGGGAGTGAGGCGTACCTCAAACCTGCAGGCGCCCA
TAATGCAATTAGAAGGACATGAGGGAGAGATTTTCACAGCGGAATTCCAT
CCCGAGGGGGAGTTATTGCTTTCTTCTGGGTTCGATAGGCAAATCTACAT
CTGGCAAGTGTACGAAGACTGCGAGAATGTGATGGCCATGTCGGGACACA
GCGGTGCTGTTATGGAAGCTCACTTTACGCCGGATGGATCGCACATTTTT
ACCTGCTCCACTGATAAAACTCTGGCCTTTTGGGACATAGCCACGGGCCA
GCGGCAACGGCGGTTCAAGGGGCATGGCAACTTCGTGAACAGCGTTCAGG
GCTCGCGTAGGGGTCAACAGCTCCTCTGCTCGGGAAGCGATGATCGCACC
ATAAAAATCTGGGACGCCAGGAAAAAACACGCGGCACACACTTTGGAATC
CCCTTTTCAAGTCACAGCTGTTTGTTTTGGTGACACTGGAGAACAAGTAA
TTAGCGGCGGGATCGACAACGAAGTCAAAATCTGGGACATTCGAAAACAG
GCTGTCTTGCACCATCTGCGAGGGCATTCGGATACGATTACCGGAATGTC
CTTGTCCCCCGAAGGAGACTTTATCTTGACAAATGCCATGGATAACACCT
TGAGGGTGTGGGACGTGAGACCTTATGCACCCGGGGAAAGATGTGTGAAG
GTATTCCAAGGCCATCAACACAATTTTG
MXO02364.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:57:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3436-PA | 1044 | CG3436-RA | 1..820 | 9..828 | 4075 | 99.8 | Plus |
CG3436-PB | 246 | CG3436-RB | 1..238 | 9..246 | 1190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3436-RC | 1381 | CG3436-RC | 213..1032 | 9..828 | 4085 | 99.9 | Plus |
CG3436-RA | 1261 | CG3436-RA | 93..912 | 9..828 | 4085 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 156736..157317 | 247..828 | 2895 | 99.8 | Plus |
2L | 23513712 | 2L | 156422..156552 | 116..246 | 655 | 100 | Plus |
2L | 23513712 | 2L | 156241..156349 | 9..117 | 545 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:30:15 has no hits.
MXO02364.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:49 Download gff for
MXO02364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3436-PA | 1..820 | 9..828 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:16 Download gff for
MXO02364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3436-RA | 93..912 | 9..828 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:57 Download gff for
MXO02364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3436-RA | 93..912 | 9..828 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:57 Download gff for
MXO02364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 156241..156348 | 9..116 | 100 | -> | Plus |
2L | 156423..156552 | 117..246 | 100 | -> | Plus |
2L | 156736..157317 | 247..828 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:16 Download gff for
MXO02364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 156241..156348 | 9..116 | 100 | -> | Plus |
arm_2L | 156423..156552 | 117..246 | 100 | -> | Plus |
arm_2L | 156736..157317 | 247..828 | 99 | | Plus |