MXO02366.3prime Sequence
688 bp (642 high quality bases) assembled on 2007-01-19
> MXO02366.3prime
ATGGTCTAGAAAGCTTGCGTCCACCATCTCCATTTGCGTCTCCTCGGATT
CCCGCCAAATGCGCTGCACCATCTCTACCAGCTGCTTCCAGAGCGCCGTC
TTACGCAGGAAGTTGGCAAGGCAGACGAGAATAAAGGCCCAAGCCAGGCC
CAAATAGTAATCCGTCTGCACAATGGGTTTATTAGACAGCGGCTCCATCT
CTGCGCGAGTGAGGATGATCGGATCAATGGCCTGCGGATTCACAGTCTTC
ATATTGGTGTGACTCATTATGAAACTGGCAAAGCTGCTCTTTGTGTCCTT
CCACCCGGGCTCGAATTTGATTAGCGGCCTGCCCTGGTGGAATAGCATCA
GTGTGGGCAGCGAAACGATGCCGAATTCTGCATTGAAACGACCAAACTCA
TAGGCATCCACATAGGCGATGGGTAGCGTGGGAAAGTAATGGGGCAGCAC
GTTGACCATCGAAGCCACACGAGCGCACTCCAAGCTGGATGCGGTGCAGA
AATGGACAAGCACACAGTTGCCCGGCTCGTGGCGCTTGGTGGCATTGCCC
ATGGGCTTAAGCAGATTCACTATATCCTTGGCACTGCGCATTATCAGCAG
TTCCGGCTCGGATGCTGTCTCATTCCTCGATATCCCGCTGCAGGCACTTC
ATCATAATAGGTGGCTTTCGAACCGGAAGCAGCTGGTT
MXO02366.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:58:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8297-PA | 888 | CG8297-RA | 217..885 | 688..19 | 3260 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8297-RA | 1057 | CG8297-RA | 288..956 | 688..19 | 3295 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15935169..15935837 | 688..19 | 3270 | 99.6 | Minus |
Blast to na_te.dros performed 2014-11-28 18:46:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tabor | 7345 | Tabor TABOR 7345bp | 202..272 | 160..229 | 109 | 63.4 | Plus |
Tabor | 7345 | Tabor TABOR 7345bp | 7041..7111 | 160..229 | 109 | 63.4 | Plus |
MXO02366.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:50 Download gff for
MXO02366.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8297-PA | 217..888 | 18..688 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:43 Download gff for
MXO02366.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8297-RA | 288..961 | 11..688 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:27 Download gff for
MXO02366.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8297-RA | 288..961 | 11..688 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:27 Download gff for
MXO02366.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15935169..15935842 | 11..688 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:43 Download gff for
MXO02366.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11822674..11823347 | 11..688 | 98 | | Minus |
MXO02366.5prime Sequence
762 bp (528 high quality bases) assembled on 2007-01-19
> MXO02366.5prime
CAGTCGACATGAACCAAAATCTCTTGTTTGTATTTTTGCTCTGCGCCGCG
CAGGGCCAGGCGGAACTCTCCGGATTACTAAGTGCCCTCCAGTATTTCGG
GCTCTTCTCAAATTTGACGGTGTATTCCCTGGGAGTTTCGCGGGGCCAGT
GCCATTATAGCTTCGAAACCTTGCTGAAGGAGCGACACACATGTGCCCCG
GATGACGAGCACATCATGCACCTAAACCAGCTGCCTCCGGTTCGAAAGCC
ACCTATTATGATGAAGTGCCTGCAGCGGGATATCGAGAATGAGACAGCAT
CCGAGCCGGAACTGCTGATAATGCGCAGTGCCAAGGATATAGTGAATCTG
CTTAAGCCCATGGGCAATGCCACCAAGCGCCACGAGCCGGGCAACTGTGT
GCTTGTCCATTTCTGCACCGCATCCAGCTTGGAGTGCGCTCGTGTGGCTT
CGATGGTCAACGTGCTGCCCCATTACTTTCCCACGCTACCCATCGCCTAT
GTGGATGCCTATGAGTTTGGTCGTTTCAATGCAGAATTCGGCATCGTTTC
GCTGCCCACACTGATGCTATTCCACCAGGGCAGGCCGCTAATCAAATTCG
AGCCCGGGTGGAAGGACACAAAGAGCAGCTTTGCCAGTTTCATAATGAGT
CACACCAATATGAAGACTGTGAATCCGCAGGCCATTGATCCGATCATCCT
CACTCGCGCAGAGATGGAGCCGCTGTCTAATAAACCCATTGTGCAGACTG
ATTACTATTTGG
MXO02366.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:58:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8297-PA | 888 | CG8297-RA | 1..754 | 9..762 | 3720 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8297-RA | 1057 | CG8297-RA | 72..825 | 9..762 | 3740 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15934981..15935706 | 37..762 | 3600 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-28 22:21:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tabor | 7345 | Tabor TABOR 7345bp | 202..272 | 752..683 | 109 | 63.4 | Minus |
Tabor | 7345 | Tabor TABOR 7345bp | 7041..7111 | 752..683 | 109 | 63.4 | Minus |
MXO02366.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:51 Download gff for
MXO02366.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8297-PA | 1..754 | 9..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:18 Download gff for
MXO02366.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8297-RA | 72..825 | 9..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:11 Download gff for
MXO02366.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8297-RA | 72..825 | 9..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:11 Download gff for
MXO02366.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15934896..15934923 | 9..36 | 100 | -> | Plus |
2R | 15934981..15935706 | 37..762 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:18 Download gff for
MXO02366.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11822401..11822428 | 9..36 | 100 | -> | Plus |
arm_2R | 11822486..11823211 | 37..762 | 99 | | Plus |