MXO02368.3prime Sequence
645 bp (644 high quality bases) assembled on 2007-01-19
> MXO02368.3prime
ATGGTCTAGAAAGCTTGCGACAAGCAGCACTGCATTGATAACACCATCGT
TTTCTGGATTGTTCGTGACCTGAGCGTATTTGCCCCAGACAACTTTTCCC
GTTTGCGTTACCAAACCCAGCTCAGAGATGTTGACTTCGATCACAGTACC
CTTTGTAATTACACCCAAGGAAGTGAACATGGGCGAGCTGGGGTTCTTCT
TGACGCCAATGATGGGCAGATTGAAGGTGGCTTTAAGCTCTGGATGCGTA
ACGTGAGCCTTTTTCATGCGCAGACCCATCGGTCGAATGAAACGCTCAAA
CTTTGGTGGCTTGCGTGTGAAGTTCTCGCCAACGAATGTGACTTTTGTGA
CCATGCGCTTCCATGCCTTTCGCTTTGTCTTTCCGGTCTTTAGTACTTTG
AAGACCTCACCATCTGACTGAGCGCGTACTTTGGGAATGGGCACGTCCCA
CTTGCCTGCCTTCTCCTTGCGCTTCTGCTTGATCATATTGGACAGGACCT
TGGCGCTGGACTGGATGCCTCTGTCGAGCAGATAATGCGGCAGGGCTCCA
TCCTCGACCTTCTCCTCCTGCTTTTTGACCTTCTTCTCTTCGTGGGCCTG
GATCTTCTTCTTAATCTGAATCTTTTCATTGCGTCGCTCCTTATT
MXO02368.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:58:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5277-PA | 780 | Ip259-RA | 151..777 | 645..19 | 2935 | 98.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ip259-RB | 1136 | CG5277-RB | 449..1075 | 645..19 | 3015 | 98.7 | Minus |
| Ip259-RA | 907 | CG5277-RA | 214..840 | 645..19 | 3015 | 98.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10408917..10409543 | 645..19 | 3015 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:47:07 has no hits.
MXO02368.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:51 Download gff for
MXO02368.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5277-PA | 151..780 | 15..645 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:12 Download gff for
MXO02368.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ip259-RA | 214..843 | 15..645 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:57 Download gff for
MXO02368.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ip259-RA | 214..843 | 15..645 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:57 Download gff for
MXO02368.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10408917..10409546 | 15..645 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:12 Download gff for
MXO02368.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10408917..10409546 | 15..645 | 98 | | Minus |
MXO02368.5prime Sequence
801 bp (693 high quality bases) assembled on 2007-01-19
> MXO02368.5prime
CAGTCGACATGCCGCAGAATGAGTATATGGAACGCCATCGCAAGCTGTAT
GGCCGGCGATTGGATTACGAGGAACGGAAACGCAAGAAGGAAGCGCGTCT
TCCCAAAGACCGAGCACGAAAGGCTCGCAAGTTGCGCGGCATCAAGGCCA
AACTCTTTAATAAGGAGCGACGCAATGAAAAGATTCAGATTAAGAAGAAG
ATCCAGGCCCACGAAGAGAAGAAGGTCAAAAAGCAGGAGGAGAAGGTCGA
GGATGGAGCCCTGCCGCATTATCTGCTCGACAGAGGCATCCAGTCCAGCG
CCAAGGTCCTGTCCAATATGATCAAGCAGAAGCGCAAGGAGAAGGCAGGC
AAGTGGGACGTGCCCATTCCCAAAGTACGCGCTCAGTCAGATGCTGAGGT
CTTCAAAGTACTAAAGACCGGAAAGACAAAGCGAAAGGCATGGAAGCGCA
TGGTCACAAAAGTCACATTCGTTGGCGAGAACTTCACACGCAAGCCACCA
AAGTTTGAGCGTTTCATTCGACCGATGGGTCTGCGCATGAAAAAGGCTCA
CGTTACGCATCCAGAGCTTAAAGCCACCTTCAATCTGCCCATCATTGGCG
TCAAGAAGAACCCCAGCTCGCCCATGTTCACTTCCTTGGGTGTAATTACA
AAGGGTACTGTGATCGAAGTCAACATCTCTGAGCTGGGTTTGGTAACACA
AACGGGAAAAGTTGTCTGGGGCAAATACGCTCAGGTCACGAACAATCCAG
AAAACGATGGTGTTATCAATGCAGTGCTGCTTGTCGCAAGCTTTCTAGAC
C
MXO02368.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:58:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5277-PA | 780 | Ip259-RA | 1..777 | 9..785 | 3660 | 98.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ip259-RB | 1136 | CG5277-RB | 299..1075 | 9..785 | 3750 | 98.8 | Plus |
| Ip259-RA | 907 | CG5277-RA | 64..840 | 9..785 | 3750 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10408767..10409543 | 9..785 | 3750 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:30:21 has no hits.
MXO02368.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:52 Download gff for
MXO02368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5277-PA | 1..780 | 9..789 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:20 Download gff for
MXO02368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ip259-RA | 55..843 | 1..789 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:02 Download gff for
MXO02368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ip259-RA | 55..843 | 1..789 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:02 Download gff for
MXO02368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10408758..10409546 | 1..789 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:20 Download gff for
MXO02368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10408758..10409546 | 1..789 | 98 | | Plus |
