MXO02374.3prime Sequence
914 bp (726 high quality bases) assembled on 2007-01-19
> MXO02374.3prime
ATGGTCTAGAAAGCTTGCGAGCCACAGACGCACTTGCTGATCCCAACTGG
TGGACGCCAGGCACATGCCATTGGGGCACAGGCTGATGCAAGTGATGCGG
TTCTCGTGACCAGACAGTGTGCCCGTGTGCCGCTGCTTCATCGTGTCCCA
CGAGTGCACGTTGCCCTCAATGCCGCCGCACATGAGGTAGCGCCCGCTGG
TCGATAGAGCGCACGACGTGAAGCCAGTGTTCTTCTGGGGCGGTTCATAC
TGGGCGATTTGCTGGTCCGCCCGCAGGTCGTACATGCGCGCCGTTTGGTC
CTCCGAGCAGGAGGCGAACCCGAAGCCACTGGGATGGTAGCAGACGGATG
ACACGTCCATGTCGTGACCGAAGAACATCTGCTTGTGGCCCTCCTCTCGC
ACATCCCACAACTTGGCAGTTTTGTCCACAGAGCCAGTGATATAGGTCTT
CATATCTGGCGAAAGCGATAAGCCAGCGATATCACCAGCGTGTCCATTGA
AATCCATTGTCTTGACACCCTTCTCCAGATCCCAATGGCATATTTTCATA
TCTCCCGAGCCGGTGATCAGATGGCCATCGTCGAGGAAGCGACAGGAGCT
GAGGAATCCCTCGTAGCCCATCAGCTCTTTGACCATCTTGGCCACTCCGG
AGGCATCGCGATTGTTCACATCGTAGACGGTGCACTGGTTGTCCATTCCT
CCGCAGGCCACAAAGTTACCCGACGGCGAAAAGGCCACCGTCATTACCCA
GGCGGATCTCAAGGGGATGATCTGCACCTTGTTGGCGGTCCAGGTGTCCC
AGATGATCAGCTTGCCGTCCAGCGATCCAGTGACGCAGTGCCGCGAGTCC
CCGGCAAAATGCACCCGAATTCCCTTGTTGATGTGGCCCTTGAAAATCTT
CTTGGAAGAAAATC
MXO02374.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:59:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8770-PA | 1041 | Gbeta76C-RA | 151..1038 | 906..19 | 4340 | 99.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta76C-RA | 1466 | CG8770-RA | 234..1129 | 914..19 | 4390 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19688291..19688663 | 914..542 | 1745 | 97.9 | Minus |
| 3L | 28110227 | 3L | 19688718..19688919 | 541..340 | 1010 | 100 | Minus |
| 3L | 28110227 | 3L | 19689059..19689188 | 339..210 | 650 | 100 | Minus |
| 3L | 28110227 | 3L | 19689547..19689655 | 127..19 | 530 | 99.1 | Minus |
| 3L | 28110227 | 3L | 19689271..19689359 | 210..122 | 445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:56:03 has no hits.
MXO02374.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:54 Download gff for
MXO02374.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8770-PA | 143..1041 | 15..914 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:15 Download gff for
MXO02374.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta76C-RA | 234..1135 | 12..914 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:20 Download gff for
MXO02374.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta76C-RA | 234..1135 | 12..914 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:20 Download gff for
MXO02374.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19689272..19689358 | 123..209 | 100 | -> | Minus |
| 3L | 19689552..19689661 | 12..122 | 97 | | Minus |
| 3L | 19688291..19688663 | 542..914 | 98 | -> | Minus |
| 3L | 19688718..19688919 | 340..541 | 100 | -> | Minus |
| 3L | 19689059..19689188 | 210..339 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:15 Download gff for
MXO02374.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19682372..19682458 | 123..209 | 100 | -> | Minus |
| arm_3L | 19682652..19682761 | 12..122 | 97 | | Minus |
| arm_3L | 19681391..19681763 | 542..914 | 98 | -> | Minus |
| arm_3L | 19681818..19682019 | 340..541 | 100 | -> | Minus |
| arm_3L | 19682159..19682288 | 210..339 | 100 | -> | Minus |
