MXO02377.3prime Sequence
579 bp (560 high quality bases) assembled on 2007-01-19
> MXO02377.3prime
ATGGTCTAGAAAGCTTGCTTCCCGATCCTTCTTGCTGACGTACTCCACGC
ACTTGGAGGGATCGGTGGGAAAGTACTCTTGGCACTTGGTCATCAGTCGT
TTGAGACCCTGGATGTACTTCCGTTGTGTTTCATCGTTCATTACGTGGGC
TACGTTTTTGGAGAAAATCTTTTCGCGACCCGTACGAGCGTGGATACCCA
CCATAGTGACACCAATGGGCCAAGGCGCGTTTCCGATGGCCATTTCTAGG
TAGGCATCGCTTGCTGTGATATAGTTGCGGTTGAGCAGGTGCTTGCAGAT
GTCTCGCAGACTGTCCAGAATGTCCTCTGGCAGGGTGTGATGCTTTAACT
TGCGAAACAGCGGCTTAACGTATTCCTTAGTCTGCGTGCCCATGACGCGG
GTCATTTTCACCTTTGTGGACATCTTTTCGTGCTTGCTGTAGTTGGCGAT
CTGGTCGTTCCACAGCTTGAGCAGGAAGGTGAGCAGCGTGATGATCACAT
CCATGTCGTAGTCCTTGTTGCGGCCCATATTTGCAGCCATTGTCTGTATG
CTCTCCCACGACACGGACTCGTCGAGCTC
MXO02377.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:00:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6011-PA | 1023 | Prp18-RA | 651..1020 | 388..19 | 1850 | 100 | Minus |
| CG6011-PA | 1023 | Prp18-RA | 460..647 | 579..392 | 940 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prp18-RA | 1304 | CG6011-RA | 538..1098 | 579..19 | 2760 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19030174..19030734 | 19..579 | 2760 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:30:28 has no hits.
MXO02377.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:56 Download gff for
MXO02377.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6011-PA | 460..1023 | 15..579 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:24 Download gff for
MXO02377.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp18-RA | 518..1085 | 11..579 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:01:06 Download gff for
MXO02377.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp18-RA | 538..1105 | 11..579 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:01:06 Download gff for
MXO02377.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19030167..19030734 | 11..579 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:24 Download gff for
MXO02377.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14855889..14856456 | 11..579 | 98 | | Plus |
MXO02377.5prime Sequence
931 bp (813 high quality bases) assembled on 2007-01-19
> MXO02377.5prime
CAGTCGACATGGATATTCTGAAAGCTGAAATAGCGCGAAAGCGCAAGCTG
CTGGAGCAAAGGCAGCTGGTGGACGAAAAGAAGAAGTACTTCAGACGCGG
TGACCTGAACGCCAAGAACACAGAGGAAGTGCTGCAGAAGGTGGGCTACA
TAAAGCAGGAGTCCGTCGAGGCACAAGGACAAACGACCGAAGGCGCGTAC
AGTTTTGTGGCCGATGGCCAGAACATATTGCCGCGCACGGAGGTCATTCG
GAGGCTAAGGGAACGCGGCGAACCCATCCTTATATTTGGCGAGACGGAGC
CCGAGGCCTTTGACCGATTGCGACAATGCGAGATTTCGCAGCCAGAGGCA
AATCGCGGTTTCCGCAACGATTTCCAGGAGGCCATGGAGCAGGTGGACGC
CGCCTACCTGCAGGAGATGTTCGCCAACACACCCACCACCAAGGAAGACA
AGAAGTCGGACTTCGCTGAGCTCGACGAGTCCGTGTCGTGGGAGAGCATA
CAGACAATGGCTGCAAATATGGGCCGCAACAAGGACTACGACATGGATGT
GATCATCACGCTGCTCACCTTCCTGCTCAAGCTGTGGAACGACCAGATCG
CCAACTACAGCAAGCACGAAAAGATGTCCACAAAGGTGAAAATGACCCGC
GTCATTTACACGCAGACTAAGGAATACGTTAAGCCGCTGTTTCGCAAGTT
AAAGCATCACACCCTGCCAGAGGACATTCTGGACAGTCTGCGAGACATCT
GCAAGCACCTGCTCAACCGCAACTATATCACAGCAAGCGATGCCTACCTA
GAAATGGCCATCGGAAACGCGCCTTGGCCCATTGGTGTCACTATGGTGGG
TATCCACTCTCGTACGGGTCGCGAAAAGATTTTCTTCCAAAACGTAGCCC
ACGTAATGAACGATGAACACACGGAGTACTC
MXO02377.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:00:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6011-PA | 1023 | Prp18-RA | 1..909 | 9..917 | 4470 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prp18-RA | 1304 | CG6011-RA | 77..987 | 7..917 | 4510 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19030285..19031195 | 917..7 | 4510 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:23:25 has no hits.
MXO02377.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:56 Download gff for
MXO02377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6011-PA | 1..927 | 9..931 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:34 Download gff for
MXO02377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp18-RA | 52..985 | 1..931 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:30 Download gff for
MXO02377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp18-RA | 72..1005 | 1..931 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:30 Download gff for
MXO02377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19030267..19031200 | 1..931 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:34 Download gff for
MXO02377.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14855989..14856922 | 1..931 | 99 | | Minus |
