MXO02378.5prime Sequence
745 bp (677 high quality bases) assembled on 2007-01-19
> MXO02378.5prime
CAGTCGACATGGCCGATGAAGCACAAGCACCACCAGCTGAGGGAGCACCA
CCAGCCGAGGGAGAGGCGCCACCACCCGCCGAGGGAGCCGAGGGTGCCGT
CGAGGGCGGAGAGGCCGCTCCACCAGCAGAGCCCGCCGAGCCCATCAAGC
ACAGCTACACGCTCTTCTACTTCAACGTGAAGGCGTTGGCCGAGCCCCTG
CGCTACCTGTTCGCCTACGGCAACCAGGAGTACGAGGATGTGCGCGTCAC
CCGCGACGAGTGGCCAGCCCTGAAGCCCACCATGCCCATGGGACAGATGC
CCGTGCTGGAGGTGGACGGCAAGCGTGTGCACCAGAGCATTTCGATGGCT
CGATTCCTGGCCAAGACTGTCGGCCTGTGCGGCGCTACTCCGTGGGAGGA
TCTGCAGATCGACATTGTCGTTGACACCATCAATGACTTCCGTCTAAAAA
TTGCAGTCGTCTCGTACGAGCCGGAGGACGAGATTAAAGAGAAGAAGTTG
GTCACCCTGAATGCGGAGGTCATTCCATTCTACCTGGAGAAGCTCGAGCA
GACCGTCAAGGACAACGATGGTCACCTGGCTCTGGGCAAGCTGACCTGGG
CCGACGTCTACTTCGCAGGCATCACCGACTACATGAACTACATGGTCAAG
CGCGATCTGTTGGAACCCTACCCAGCTCTGGCGGAGTCTGATGCCGCACG
CTTTGACCATCAAGGCCTGATCAACGCCGTCCAGCCAGTTCAACT
MXO02378.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:00:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8938-PA | 750 | GstS1-RA | 1..681 | 9..688 | 3365 | 99.8 | Plus |
| CG8938-PB | 750 | GstS1-RB | 1..681 | 9..688 | 3365 | 99.8 | Plus |
| CG8938-PC | 750 | GstS1-RC | 1..681 | 9..688 | 3365 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstS1-RC | 1461 | CG8938-RC | 525..1243 | 9..719 | 3405 | 98.9 | Plus |
| GstS1-RB | 1402 | CG8938-RB | 235..953 | 9..719 | 3405 | 98.9 | Plus |
| GstS1-RA | 1764 | CG8938-RA | 200..918 | 9..719 | 3405 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17094765..17095035 | 279..9 | 1355 | 100 | Minus |
| 2R | 25286936 | 2R | 17094529..17094696 | 447..280 | 840 | 100 | Minus |
| 2R | 25286936 | 2R | 17094316..17094458 | 590..448 | 715 | 100 | Minus |
| 2R | 25286936 | 2R | 17094139..17094230 | 680..589 | 460 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:46:45 has no hits.
MXO02378.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:57 Download gff for
MXO02378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8938-PC | 1..702 | 9..705 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:47 Download gff for
MXO02378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstS1-RA | 193..901 | 1..705 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:31 Download gff for
MXO02378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstS1-RA | 193..901 | 1..705 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:31 Download gff for
MXO02378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17094139..17094228 | 591..680 | 100 | <- | Minus |
| 2R | 17094316..17094458 | 448..590 | 100 | <- | Minus |
| 2R | 17094529..17094696 | 280..447 | 100 | <- | Minus |
| 2R | 17094765..17095040 | 1..279 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:47 Download gff for
MXO02378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12981644..12981733 | 591..680 | 100 | <- | Minus |
| arm_2R | 12981821..12981963 | 448..590 | 100 | <- | Minus |
| arm_2R | 12982034..12982201 | 280..447 | 100 | <- | Minus |
| arm_2R | 12982270..12982545 | 1..279 | 98 | | Minus |
