MXO02380.3prime Sequence
573 bp (573 high quality bases) assembled on 2007-01-19
> MXO02380.3prime
ATGGTCTAGAAAGCTTGCGGCGGCCACTTCGCTAGCCTCGGCCCCATTCT
GAACCTCATCCTTTGTGCTGGCCTCATCAAGCTTAGCCTTTTTCTCCGGC
GTGGCGACGGCCTCATCTGCCTTGGCTGCAGCCTCATCCACCTTCCGCTT
TACAGCCTCAATGGCGGGAGCATCTGTTGAGTCACCGTTGGTGACCTCCT
CGGAGCCATTCTCGACAGCAGGTAGAACAGCTTCGCTGCTCTCTTTTTTG
GTGTCCTCCCCATCGGCAGCGGAATCCTCTTTTTTATCCTCGTCCTTCTT
CTCATCCTTATCGGCGGCAAAAGAAACAGTGGGCTCAGACGCCTTTTCAC
CATCGACTGCGTCGGTGGGCTCGGTCGCGCTGCTGTCGGCGGCTCCGTTC
TCCTTGGCTACGCTCTCCTCTTCGGCGCCACCGTTTTCTGTGATGCTCGC
CTTCTCAGCTGCTACCTCCTCGGCGGCAACTGCATCTTTCTTCACAGCAT
CAACTTCCTCAGCTGCGACCTTCTCGACAACAGGGGTCTCATTCTTTTGC
TCAGCCACATCAGCCATGTCGAC
MXO02380.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:00:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2207-PF | 552 | Df31-RF | 1..549 | 567..19 | 2745 | 100 | Minus |
CG2207-PA | 552 | Df31-RA | 1..549 | 567..19 | 2745 | 100 | Minus |
CG2207-PB | 552 | Df31-RB | 1..549 | 567..19 | 2745 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Df31-RB | 1424 | CG2207-RB | 133..681 | 567..19 | 2745 | 100 | Minus |
Df31-RA | 1532 | CG2207-RA | 241..789 | 567..19 | 2745 | 100 | Minus |
Df31-RF | 2083 | CG2207-RF | 241..789 | 567..19 | 2745 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21627842..21628209 | 174..541 | 1840 | 100 | Plus |
2L | 23513712 | 2L | 21627603..21627761 | 19..177 | 795 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:20:30 has no hits.
MXO02380.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:19:59 Download gff for
MXO02380.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2207-PB | 1..552 | 15..567 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:55 Download gff for
MXO02380.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Df31-RF | 235..793 | 14..573 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:41 Download gff for
MXO02380.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Df31-RF | 235..793 | 14..573 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:41 Download gff for
MXO02380.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21627599..21627757 | 14..173 | 98 | <- | Plus |
2L | 21627842..21628209 | 174..541 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:55 Download gff for
MXO02380.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21627599..21627757 | 14..173 | 98 | <- | Plus |
arm_2L | 21627842..21628209 | 174..541 | 100 | <- | Plus |
MXO02380.5prime Sequence
788 bp (785 high quality bases) assembled on 2007-01-19
> MXO02380.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCAGCGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTG
TCGCAAACTATCACGGCTACCACATCGTCTTTGCATTA
MXO02380.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 06:00:54 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:23:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 20:23:30 has no hits.
Blast to na_te.dros performed on 2014-11-28 20:23:30 has no hits.
MXO02380.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:04:35 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:04:35 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:48:37 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:48:37 has no hits.