MXO02382.3prime Sequence
754 bp (747 high quality bases) assembled on 2007-01-19
> MXO02382.3prime
ATGGTCTAGAAAGCTTGCCAGGTGCTTGCCGAACCACTTGTGGTCCACGG
GCGAGAGCCAACGGTGGCAGCCGCTGAGGTTGTTCTGGATCACGTACTTC
ATGGTAAAGGGGTTCTCATTCTGGCGGGTCTGTTCCTCCTCGGCGACGCG
CTGTTCGTCGAGCATCTCCTGGGAAACGACGGTGGCCTGGAAGGGCAGCT
GGTTGGCCACCTGCTGCAGGAACTGCTTGACCTCAACGAACTCGCACTTG
CCGGCTATCTCGACAATGACGCGACCGGCCTTGATGGGGGTCACGTAGTG
GTCGATGGCTCCCTTTCCGCCGCCCATCCGTTGGCCCTGGCCCTTCTTAG
TGATCGGCTGCCAGGGTGCGGGAACGCGCCATGTGGCGAACATAGTGTTG
ACGTTCATCTTGCGTCCGATGGTCAAACGCATCATTTCGTAGTGGCCCCA
GCGCAGGCGCCCTCCGCCAGTGGCCACGATTGCGTACTGCTTATGGAGCA
GCGTGTTGTGCACCATCTCCGGACCGCGCATGTATCGCAGGCGCTTCTGC
ATCTTTGGCGGACGGATGTTTGGCGGCAGCTGGGGCTGGCGCTCAATGAC
CCTCAGCTTGGGTCTCTCCGGCTGCTCCACATTCTGGTATTTAATAGGCG
GAGCGAAATACTTAAGACCGGCTGTGTTGACAATTGCCATGTTGCCCGAC
GCAAGGCTTTGCTTAAAGAGCTGGGAGACTAACTTTAATGAGAGCATGTC
CGAC
MXO02382.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:01:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3109-PA | 732 | mRpL16-RA | 1..729 | 747..19 | 3645 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL16-RB | 1076 | CG3109-RB | 91..820 | 748..19 | 3650 | 100 | Minus |
mRpL16-RA | 869 | CG3109-RA | 91..820 | 748..19 | 3650 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1890613..1891226 | 632..19 | 3070 | 100 | Minus |
X | 23542271 | X | 1890478..1890543 | 698..633 | 330 | 100 | Minus |
X | 23542271 | X | 1890346..1890395 | 748..699 | 250 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:16:34 has no hits.
MXO02382.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:01 Download gff for
MXO02382.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3109-PA | 1..732 | 18..747 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:39 Download gff for
MXO02382.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL16-RA | 86..820 | 19..754 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:06 Download gff for
MXO02382.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL16-RA | 86..820 | 19..754 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:06 Download gff for
MXO02382.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1890341..1890395 | 699..754 | 92 | -> | Minus |
X | 1890478..1890543 | 633..698 | 100 | -> | Minus |
X | 1890613..1891226 | 19..632 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:39 Download gff for
MXO02382.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1784374..1784428 | 699..754 | 92 | -> | Minus |
arm_X | 1784511..1784576 | 633..698 | 100 | -> | Minus |
arm_X | 1784646..1785259 | 19..632 | 100 | | Minus |
MXO02382.5prime Sequence
635 bp (608 high quality bases) assembled on 2007-01-19
> MXO02382.5prime
CAGTCGACATGCTCTCATTAAAGTTAGTCTCCCAGCTCTTTAAGCAAAGC
CTTGCGTCGGGCAACATGGCAATTGTCAACACAGCCGGTCTTAAGTATTT
CGCTCCGCCTATTAAATACCAGAATGTGGAGCAGCCGGAGAGACCCAAGC
TGAGGGTCATTGAGCGCCAGCCCCAGCTGCCGCCAAACATCCGTCCGCCA
AAGATGCAGAAGCGCCTGCGATACATGCGCGGTCCGGAGATGGTGCACAA
CACGCTGCTCCATAAGCAGTACGCAATCGTGGCCACTGGCGGAGGGCGCC
TGCGCTGGGGCCACTACGAAATGATGCGTTTGACCATCGGACGCAAGATG
AACGTCAACACTATGTTCGCCACATGGCGCGTTCCCGCACCCTGGCAGCC
GATCACTAAGAAGGGCCAGGGCCAACGGATGGGCGGCGGAAAGGGAGCCA
TCGACCACTACGTGACCCCCATCAAGGCCGGTCGCGTCATTGTCGAGATA
GCCGGCAAGTGCGAGTTCGTTGAGGTCAAGCAGTTCCTGCAGCAGGTGGC
CAACCAGCTGCCCTTCCAGGCCACCGTCGTTTCCCAGGAGATGCTCGACG
AACAGCGCGTCCCAGAGGACAACCGCCAATGAAAC
MXO02382.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:01:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3109-PA | 732 | mRpL16-RA | 1..603 | 9..611 | 3015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL16-RB | 1076 | CG3109-RB | 91..702 | 8..619 | 3030 | 99.7 | Plus |
mRpL16-RA | 869 | CG3109-RA | 91..702 | 8..619 | 3030 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1890613..1891108 | 124..619 | 2450 | 99.6 | Plus |
X | 23542271 | X | 1890478..1890543 | 58..123 | 330 | 100 | Plus |
X | 23542271 | X | 1890346..1890395 | 8..57 | 250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:26:36 has no hits.
MXO02382.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:01 Download gff for
MXO02382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3109-PA | 1..616 | 9..623 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:53 Download gff for
MXO02382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL16-RA | 84..707 | 1..623 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:07 Download gff for
MXO02382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL16-RA | 84..707 | 1..623 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:07 Download gff for
MXO02382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1890339..1890395 | 1..57 | 92 | -> | Plus |
X | 1890478..1890543 | 58..123 | 100 | -> | Plus |
X | 1890613..1891113 | 124..623 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:53 Download gff for
MXO02382.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1784372..1784428 | 1..57 | 92 | -> | Plus |
arm_X | 1784511..1784576 | 58..123 | 100 | -> | Plus |
arm_X | 1784646..1785146 | 124..623 | 99 | | Plus |