Clone Sequence Records
MXO02387.3prime Sequence
663 bp (663 high quality bases) assembled on 2007-01-19
> MXO02387.3prime
ATGGTCTAGAAAGCTTGCTCCAATTGCCTTGGCCATGTCCTTCAGCGCCT
CGGAGCGATGTGCGTTGCGCATCTGCTTGTTAAGGATATCGAAGATGCGG
TTGTACTTGCTGTCGGTTTCCGTGCGGCAGATGGCGCAGAACTGCGAGGA
CAGCACGTTGAGTGGACTACGGAAGTACAGGCTCTTCTGCATGGTGAGAC
CGTTCCTGTGGTGGGACATCATGTGCAGGACGATCTCGATGAGGGCCAGC
GTGGCTCCAATGACGAAGTTGTAGCAGAAGAGCGTGGGCACCAGGAACAG
CAAGTAGGGGTTGCGGTTGTAGCCCAGGATTATGTTGTTGCTCACGCCAT
CCATTTGACAATAGTCCTCGCGTTCGTAGCCCGGAGTGACCTTTTTGGGT
GCCCTGTTGGGAATCGCGGTGGCTGCCCCATATCTCACCGTATTGGCCAG
CTCGTCGTCTACCTCATCGCATATGGTTCCGCGGAGATAGTGCTTGGGTA
CATGGAAATTCGTGTGTTTGCGGAAGTGAACCTTGGTCACCTGGTCGTGG
ATCGGTTCACCGGTCTCCTCATCGAAGGCCGGTCTATTAACGCGGACGGT
GTCTGTGTAGAAGTACTCCAACTCACCCGTTTCGCAGTTCTTAATGGAAT
AACCCATGTCGAC
MXO02387.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:02:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1927-PA | 642 | CG1927-RA | 1..639 | 657..19 | 3195 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1927-RA | 1198 | CG1927-RA | 462..1101 | 658..19 | 3200 | 100 | Minus |
| CG1927-RB | 744 | CG1927-RB | 26..647 | 640..19 | 3110 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1966822..1967139 | 19..336 | 1590 | 100 | Plus |
| 3L | 28110227 | 3L | 1967200..1967504 | 337..641 | 1525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:16:36 has no hits.
MXO02387.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:03 Download gff for
MXO02387.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1927-PA | 1..642 | 15..657 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:40 Download gff for
MXO02387.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1927-RA | 457..1107 | 12..663 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:09 Download gff for
MXO02387.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1927-RA | 457..1107 | 12..663 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:09 Download gff for
MXO02387.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1967200..1967502 | 337..639 | 100 | <- | Plus |
| 3L | 1966816..1967139 | 12..336 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:40 Download gff for
MXO02387.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1966816..1967139 | 12..336 | 99 | <- | Plus |
| arm_3L | 1967200..1967502 | 337..639 | 100 | <- | Plus |
MXO02387.5prime Sequence
663 bp (663 high quality bases) assembled on 2007-01-19
> MXO02387.5prime
CAGTCGACATGGGTTATTCCATTAAGAACTGCGAAACGGGTGAGTTGGAG
TACTTCTACACAGACACCGTCCGCGTTAATAGACCGGCCTTCGATGAGGA
GACCGGTGAACCGATCCACGACCAGGTGACCAAGGTTCACTTCCGCAAAC
ACACGAATTTCCATGTACCCAAGCACTATCTCCGCGGAACCATATGCGAT
GAGGTAGACGACGAGCTGGCCAATACGGTGAGATATGGGGCAGCCACCGC
GATTCCCAACAGGGCACCCAAAAAGGTCACTCCGGGCTACGAACGCGAGG
ACTATTGTCAAATGGATGGCGTGAGCAACAACATAATCCTGGGCTACAAC
CGCAACCCCTACTTGCTGTTCCTGGTGCCCACGCTCTTCTGCTACAACTT
CGTCATTGGAGCCACGCTGGCCCTCATCGAGATCGTCCTGCACATGATGT
CCCACCACAGGAACGGTCTCACCATGCAGAAGAGCCTGTACTTCCGTAGT
CCACTCAACGTGCTGTCCTCGCAGTTCTGCGCCATCTGCCGCACGGAAAC
CGACAGCAAGTACAACCGCATCTTCGATATCCTTAACAAGCAGATGCGCA
ACGCACATCGCTCCGAGGCGCTGAAGGACATGGCCAAGGCAATTGGAGCA
AGCTTTCTAGACC
MXO02387.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:02:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1927-PA | 642 | CG1927-RA | 1..639 | 9..647 | 3195 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1927-RA | 1198 | CG1927-RA | 462..1101 | 8..647 | 3200 | 100 | Plus |
| CG1927-RB | 744 | CG1927-RB | 26..647 | 26..647 | 3110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1966822..1967139 | 647..330 | 1590 | 100 | Minus |
| 3L | 28110227 | 3L | 1967200..1967504 | 329..25 | 1525 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:46:13 has no hits.
MXO02387.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:04 Download gff for
MXO02387.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1927-PA | 1..642 | 9..651 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:57 Download gff for
MXO02387.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1927-RA | 455..1107 | 1..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:40 Download gff for
MXO02387.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1927-RA | 455..1107 | 1..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:40 Download gff for
MXO02387.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1966816..1967139 | 330..654 | 99 | <- | Minus |
| 3L | 1967200..1967502 | 27..329 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:57 Download gff for
MXO02387.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1966816..1967139 | 330..654 | 99 | <- | Minus |
| arm_3L | 1967200..1967502 | 27..329 | 100 | <- | Minus |
