MXO02389.3prime Sequence
631 bp (629 high quality bases) assembled on 2007-01-19
> MXO02389.3prime
ATGGTCTAGAAAGCTTGCGACGGCGAGCAGTTTTTCACCGCCCTCGACGT
CGTACTGCAGGCACAGGCGGTCGAACTCCGCTGACTTCTTGTCTAGATCG
GTGACAAAGTCGCTCTTGGGATAGAACTGCCTCAGCTGTTCTAGATTCCG
GGTGATCGCCTCTGTCGGCTTGCCCGTAAGATGGGCATGAACCATCAGAT
TGATCAGCGTGTCGTAGTCGTTGTGCTTCTTCAGCAGAGATTCACGCAGA
ACGGAATCTGCCTCCTCGTACCGCTCCAGACCCAAATGAACGACCGCTTG
GCCGTTCAGCAGCGCCGGAGTTGGCTTGAACTTTTCACAGAACTCCTGGT
AGATGTGAAAGGCGTCCTGCATCTGTTCCGTTCCCTGGGCGAGGGCCACC
CACGCCTGAGCGAGCTGAGTCAGCGTAGCATCGTCGCTGATCTCCTGCAT
CTTGGCCACCAGCTGCTTGGCCAGGTCCACGCGCTGCAGACGCAGCAGGC
ACTGGACCGACAGAGCCATCGACTCCAGATTGGTGGAGCCGTGCAGGATC
TTCAGTGCGTTCTCGAACTGCCCGTCGTGGCAGTAGACCATGGCGGTTGC
AAGGTGCCAGATGTTGGTCTCATCCTCCTCT
MXO02389.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:02:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9543-PA | 921 | CG9543-RA | 306..918 | 631..19 | 3040 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| epsilonCOP-RA | 1105 | CG9543-RA | 407..1019 | 631..19 | 3050 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6489496..6490108 | 631..19 | 3050 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:26:43 has no hits.
MXO02389.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:04 Download gff for
MXO02389.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9543-PA | 306..921 | 18..631 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:55 Download gff for
MXO02389.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| epsilonCOP-RA | 407..1019 | 19..631 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:11 Download gff for
MXO02389.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| epsilonCOP-RA | 407..1019 | 19..631 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:11 Download gff for
MXO02389.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6489496..6490108 | 19..631 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:55 Download gff for
MXO02389.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6489496..6490108 | 19..631 | 99 | | Minus |
MXO02389.5prime Sequence
902 bp (720 high quality bases) assembled on 2007-01-19
> MXO02389.5prime
CAGTCGACATGAGCCGACAGCAGAATGAGGAGGACACCAACTCGGTGCTA
TTCGATGCCCGCAACGAGTACTACATCGGTAACTTCATGGGCTCGATCAA
CTTCGTGCTGCCGGAGCAGGGTACCGCGGGTCCGGAGCTCCTGTCCTACA
TGTACCTATCTTACTTGGCCATCGATTCCGGGCGCATCGTGGCCTCGGAC
ATCAAGGAGGGAAACTCCACGCCACTGCAGGCCTTGCGTCTGGTGCACGA
AGCCTTTGAGCAGCCTTCGAGGACGGAGGAGCTGCTGGAGAAACTCACGG
ACAAGGTGGCCGGAGAGGAGGATGAGACCAACATCTGGCACCTTGCAACC
GCCATCGTCTACTGCCACGACGGGCAGTTCGAGAACGCACTGAAGATCCT
GCACGGCTCCACCAATCTGGAGTCGATGGCTCTGTCGGTCCAGTGCCTGC
TGCGTCTGCAGCGCGTGGACCTGGCCAAGCAGCTGGTGGCCAAGATGCAG
GAGATCAGCGACGATGCTACGCTGACTCAGCTCGCTCAGGCGTGGGTGGC
CCTCGCCCAGGGAACGGAACAGATGCAGGACGCCTTTCACATCTACCAGG
AGTTCTGTGAAAAGTTCAAGCCAACTCCGGCGCTGCTGAACGGCCAAGCG
GTCGTTCATTTGGGTCTGGAGCGGTACGAGGAGGCAGATTCCGTTCTGCG
TGAATCTCTGCTGAAGAAGCACAACGACTACGACACGCTGATCAATCTGA
TGGTTCATGCCCATCTTACGGGCAAGCCGACAGAGGCGATCACCCGGAAT
CTAAAACAGCTGAGGCAGTTCTATCCCAAGAGCGACTTTGTCACCGATCT
AGACAAAAAGTCAGCGGAGTTCGACCGCCTGTGCCTGCAGTACGACGTCG
AG
MXO02389.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:02:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9543-PA | 921 | CG9543-RA | 1..894 | 9..902 | 4420 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| epsilonCOP-RA | 1105 | CG9543-RA | 102..995 | 9..902 | 4440 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6489191..6490084 | 9..902 | 4440 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:20:38 has no hits.
MXO02389.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:05 Download gff for
MXO02389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9543-PA | 1..894 | 9..902 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:58 Download gff for
MXO02389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| epsilonCOP-RA | 102..995 | 9..902 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:45 Download gff for
MXO02389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| epsilonCOP-RA | 102..995 | 9..902 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:45 Download gff for
MXO02389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6489191..6490084 | 9..902 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:58 Download gff for
MXO02389.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6489191..6490084 | 9..902 | 99 | | Plus |
