MXO02392.3prime Sequence
134 bp (132 high quality bases) assembled on 2007-01-19
> MXO02392.3prime
ATGGTCTAGAAAGCTTGCGGCATAGTTTTGCAGTAATATCACTTGGGACT
TTTTCAGCGACTCCCGGCACAAGGGGCACTCATCCCGCTCCTCCAGCCAC
TCGAGCAGGCAGCTCCAGCAAAAGATGTGGCCGC
MXO02392.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:03:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7864-PA | 900 | CG7864-RA | 782..897 | 134..19 | 580 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pex10-RB | 1028 | CG7864-RB | 832..947 | 134..19 | 580 | 100 | Minus |
Pex10-RA | 1487 | CG7864-RA | 1291..1406 | 134..19 | 580 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1559667..1559782 | 134..19 | 580 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:20:46 has no hits.
MXO02392.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:07 Download gff for
MXO02392.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7864-PA | 782..900 | 15..134 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:00 Download gff for
MXO02392.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex10-RA | 1291..1413 | 11..134 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:05:48 Download gff for
MXO02392.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex10-RA | 1291..1413 | 11..134 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:05:48 Download gff for
MXO02392.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1559667..1559789 | 11..134 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:00 Download gff for
MXO02392.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1559667..1559789 | 11..134 | 97 | | Minus |
MXO02392.5prime Sequence
323 bp (319 high quality bases) assembled on 2007-01-19
> MXO02392.5prime
CAGTCGACATGGACTTTCGGAACGCCCGTGCCCGGCAGCCGGAGATCGTG
AGATCCGTGCAGAAGGATGCACGGTACACCAACGAGCTGGCCGAAGACTT
GTCCGATGTCTTGCGCCTCACCGGTCCACGGAACTGGATAAAGTACAACC
AGATGTGCCGACTTCTGGCGGAGCTCAGTTACCACGGATTCGCCTCGGCC
AATAACCTTCAGACCCTCGGCGAAGAGTACACGGGGATAATACAGGTGGA
CGGGAACTATAAGCAGATTCCCAGCAGATTGTTACAACTGATTGCCATTG
TCCTGGAGTTTGGTGGCGACTCC
MXO02392.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 06:03:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7864-PA | 900 | CG7864-RA | 1..315 | 9..323 | 1550 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pex10-RB | 1028 | CG7864-RB | 47..365 | 5..323 | 1580 | 99.7 | Plus |
Pex10-RA | 1487 | CG7864-RA | 506..824 | 5..323 | 1580 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1558828..1559104 | 5..281 | 1370 | 99.6 | Plus |
3L | 28110227 | 3L | 1559158..1559200 | 281..323 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:33:02 has no hits.
MXO02392.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:07 Download gff for
MXO02392.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7864-PA | 1..315 | 9..323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:41 Download gff for
MXO02392.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex10-RA | 503..824 | 1..323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:12 Download gff for
MXO02392.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pex10-RA | 503..824 | 1..323 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:12 Download gff for
MXO02392.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1558825..1559104 | 1..281 | 98 | -> | Plus |
3L | 1559159..1559200 | 282..323 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:41 Download gff for
MXO02392.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1558825..1559104 | 1..281 | 98 | -> | Plus |
arm_3L | 1559159..1559200 | 282..323 | 100 | | Plus |