MXO02401.3prime Sequence
839 bp (764 high quality bases) assembled on 2006-12-21
> MXO02401.3prime
ATGGTCTAGAAAGCTTGCACCCACAGTCAGGGCCATGATGGCATTGACCA
CATCGTTGTCGTTCTTCAGCAGCGCCTGGATCGCCTTTTTGCGCGAGCAC
GCGGCCTGCATCTGTACCAGTTCGATGTCCTTCGCATGTAGGCCCATGGC
ATCCGCGTCCTCGCCATCGTTCTCGTCGTCGTCGTCGTCGTGTGGGGACT
CCTCGCCAGGGGCTTTTCCATCCTCGTTACCTTGCCGCCCGGCAGGCGAG
GTTCCACGGAATCGCTCGGCCGCCTTGACAGCTGCCTGGGAGGCGACGGA
CGTGGTGCTAGTGTCCTCCACGCAGATCTCCCCAAAGAAGATGTACGTCG
ACGAGTGCGCCACTCTGTAGACGTCCGGCTGATCGATGTACAAGAGGATG
TTCTTGCCCTTCTTCATGGTCACTCGGGCCACGTTCTCCATGGGCTTCAG
GTCCAGCTTCATGAGGATCCGGCGTGCCTTCCGCTCGCCGCGAGACTGCT
TTGATACCTCACGTGTTCGCACGGCCACCGTACCGAGTTGACCCTGCTCG
TCCGGTTGGGTCTCCTTGGGATCCGCTTCCACGAGATCCGGGGCGTCATC
GGAGTCCGTGCTCTGATCATCCTCAACTACGCAGGATTTCGCGGCGGAGG
CGCCCTCCTCCTTCTGCGAGTTCGGCAGACTGAACACATTGGGCGGCAGC
TGTTTGGCCAGGCTCATCAGCTTCTTGATCTTGTTGCGGTAGGCCGGGTC
CATTTGACCCATGATGTGGGGCTTCCCCTTTGCGCCACTAAAGCCTGCCG
GAGGTTTATTCTTGACATCCAAAGCGTCTTCCGAACTGG
MXO02401.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:21:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4415-PA | 1044 | CG4415-RA | 221..1041 | 839..19 | 4080 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:57:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4415-RB | 1288 | CG4415-RB | 354..1174 | 839..19 | 4090 | 99.9 | Minus |
CG4415-RA | 1368 | CG4415-RA | 354..1174 | 839..19 | 4090 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:57:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1037599..1038419 | 839..19 | 4090 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:57:38 has no hits.
MXO02401.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:25:35 Download gff for
MXO02401.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4415-PA | 221..1044 | 15..839 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:09 Download gff for
MXO02401.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4415-PA | 221..1044 | 15..839 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:50 Download gff for
MXO02401.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4415-RA | 354..1183 | 8..839 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:41 Download gff for
MXO02401.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4415-RA | 354..1183 | 8..839 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:41 Download gff for
MXO02401.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1037599..1038428 | 8..839 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:50 Download gff for
MXO02401.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1037599..1038428 | 8..839 | 99 | | Minus |
MXO02401.5prime Sequence
831 bp (812 high quality bases) assembled on 2006-12-21
> MXO02401.5prime
CAGTCGACATGGGTAAGAAGCAGAAAATGAAGAAGGCTGCCCAGATGGCG
ACCGCTGCCGAGAAATTGAAGACCGCTGCCGAGAAATCGAAGACCGCTGC
CGACAACGTGGTGGCCAAAGAAAAGCCTGCCGAAGAAGCCTCTCCCTCAC
CAAGTGGCAGTGGAAAAAAAGGGAAGCCCAAGGCAACGCAAAAACCAAAC
GTCGCAAAGGCACTTCAGAAGGAGATCTCCAGTTCGGAAGACGCCTTGGA
TGTCAAGAATAAACCTCCGGCAGGCTTTAGTGGCGCAAAGGGGAAGCCCC
ACATCATGGGTCAAATGGACCCGGCCTACCGCAACAAGATCAAGAAGCTG
ATGAGCCTGGCCAAACAGCTGCCGCCCAATGTGTTCAGTCTGCCGAACTC
GCAGAAGGAGGAGGGCGCCTCCGCCGCGAAATCCTGCGTAGTTGAGGATG
ATCAGAGCACGGACTCCGATGACGCCCCGGATCTCGTGGAAGCGGATCCC
AAGGAGACCCAACCGGACGAGCAGGGTCAACTCGGTACGGTGGCCGTGCG
AACACGTGAGGTATCAAAGCAGTCTCGCGGCGAGCGGAAGGCACGCCGGA
TCCTCATGAAGCTGGACCTGAAGCCCATGGAGAACGTGGCCCGAGTGACC
ATGAAGAAGGGCAAGAACATCCTCTTGTACATCGATCAGCCGGACGTCTA
CAGAGTGGCGCACTCGTCGACGTACATCTTCTTTGGGGAGATCTGCGTGG
AGGACACTAGCACCACGTCCGTCGCCTCCCAGGCAGCTGTCAAGGCGGCC
GAGCGATTCCGTGGAACCTCGCCTGCCGGGC
MXO02401.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:21:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4415-PA | 1044 | CG4415-RA | 1..823 | 9..831 | 4115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4415-RB | 1288 | CG4415-RB | 134..956 | 9..831 | 4115 | 100 | Plus |
CG4415-RA | 1368 | CG4415-RA | 134..956 | 9..831 | 4115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1037379..1038201 | 9..831 | 4115 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:47:57 has no hits.
MXO02401.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:25:37 Download gff for
MXO02401.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4415-PA | 1..823 | 9..831 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:10 Download gff for
MXO02401.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4415-PA | 1..823 | 9..831 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:42 Download gff for
MXO02401.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4415-RA | 127..956 | 1..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:36 Download gff for
MXO02401.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4415-RA | 127..956 | 1..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:36 Download gff for
MXO02401.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1037372..1038201 | 1..831 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:42 Download gff for
MXO02401.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1037372..1038201 | 1..831 | 99 | | Plus |