Clone Sequence Records
MXO02423.3prime Sequence
828 bp (791 high quality bases) assembled on 2006-12-21
> MXO02423.3prime
ATGGTCTAGAAAGCTTGCATTATATTTGGGCTTGGTGCGGGCCACTCTTT
TGCCGGTGAACCCCTTGCTGGCCAAATAATCACGGATGCCGCGTTTGGTG
TGCACCTTCAGTTTGCAGATGTCGAACTCCAGCTCCTTGTTGCAGTACTC
GGCGCCCTCCATGCGTTGAATGAAATGGATGACGTGGAGCAGCACCTCGC
CGTCCAGCTGCTGAATCTTGGCGTGCAGATCAAGGTCCTCCTCGGTTGTA
AAGGGCTCCTGCTGCTCCGAAGTTTCCAAAGTTGCCGGCGGAGTCCAATC
GGGGGTCGGAGTACATTCGGTGGTTGGAGTACATGAGGGGGGCGCACCCA
TTATGGAGGGGGACACCTCCGAGCCGTTCACCTCGTCCTCCGGCGATGAT
GAGTCCGATTCATCCGAGGAGCTCTCTTCCTCGGCACGCACTTTACTGCC
GCTGGAGCAGATGTAGAGCTGCACCTGGGAGTACATCTCCTCAAAGATGA
TCTGCAGCTGTTTGGCCATGTGGTAGCACAGGTGATCGGGATTCGTGTAC
AGATAGGTGTTGTAGAAAATCAGCCTTATGTCTTTGGCGAAATCCGCGGC
ACTGAGATAGCAACCCGTATTCAAACGATGCCTCACGGTGGACAGATCCA
TGGGTTCCCGGACAATCTCATGGTAATCGTGGAGGCCCAGCAGTTGCGGA
TCCAGTGGCTCGTAGAAAACCCAAGCAATATTCTTATAGGTACTGGAAAA
CAACCTTTTAATAATCACCTTGCAAGCATTAATTTCCGGCGAGGAACGTT
CAGTTTCTTGTTTTGCAGCCATGTCGAC
MXO02423.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:22:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30417-PA | 807 | CG30417-RA | 1..804 | 822..19 | 3970 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30417-RA | 843 | CG30417-RA | 26..829 | 822..19 | 3990 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23326753..23327556 | 19..822 | 3990 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:11:11 has no hits.
MXO02423.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:26:44 Download gff for
MXO02423.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-PA | 1..807 | 16..822 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:26 Download gff for
MXO02423.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-PA | 1..807 | 16..822 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:23 Download gff for
MXO02423.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 19..837 | 9..828 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:21 Download gff for
MXO02423.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 19..837 | 9..828 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:21 Download gff for
MXO02423.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23326745..23327560 | 9..828 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:23 Download gff for
MXO02423.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19214268..19215083 | 9..828 | 98 | | Plus |
MXO02423.5prime Sequence
828 bp (755 high quality bases) assembled on 2006-12-21
> MXO02423.5prime
CAGTCGACATGGCTGCAAAACAAGAAACTGAACGGTCCTCGCCGGAAATT
AATGCCTGCAAGGTGATTATTAAAAGGTTGTTTTCCAGTACCTATAAGAA
TATTGCTTGGGTTTTCTACGAGCCACTGGATCCGCAACTGCTGGGCCTCC
ACGATTACCATGAGATTGTCCGGGAACCCATGGATCTGTCCACCGTGAGG
CATCGTTTGAATACGGGTTGCTATCTCAGTGCCGCGGATTTCGCCAAAGA
CATAAGGCTGATTTTCTACAACACCTATCTGTACACGAATCCCGATCACC
TGTGCTACCACATGGCCAAACAGCTGCAGATCATCTTTGAGGAGATGTAC
TCCCAGGTGCAGCTCTACATCTGCTCCAGCGGCAGTAAAGTGCGTGCCGA
GGAAGAGAGCTCCTCGGATGAATCGGACTCATCATCGCCGGAGGACGAGG
TGAACGGCTCGGAGGTGTCCCCCTCCATAATGGGTGCGCCCCCCTCATGT
ACTCCAACCACCGAATGTACTCCGACCCCCGATTGGACTCCGCCGGCAAC
TTTGGAAACTTCGGAGCAGCAGGAGCCCTTTACAACCGAGGAGGACCTTG
ATCTGCACGCCAAGATTCAGCAGCTGGACGGCGAGGTGCTGCTCCACGTC
ATCCATTTCATTCAACGCATGGAGGGCGCCGAGTACTGCAACAAGGAGCT
GGAGTTCGACATCTGCAAACTGAAGGTGCACACCAAACGCGGCATCCGTG
ATTATTTGGCCAGCAAGGGGTTCACCGGCAAAAGAGTGGCCCGCACCAAG
CCCAAATATAATGCAAGCTTTCTAGACC
MXO02423.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:22:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30417-PA | 807 | CG30417-RA | 1..804 | 9..812 | 4020 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30417-RA | 843 | CG30417-RA | 26..829 | 9..812 | 4020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23326753..23327556 | 812..9 | 4020 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:08:41 has no hits.
MXO02423.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:26:46 Download gff for
MXO02423.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-PA | 1..807 | 9..815 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:26 Download gff for
MXO02423.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-PA | 1..807 | 9..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:18 Download gff for
MXO02423.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 21..837 | 1..822 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:58 Download gff for
MXO02423.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30417-RA | 21..837 | 1..822 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:58 Download gff for
MXO02423.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23326745..23327561 | 1..822 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:18 Download gff for
MXO02423.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19214268..19215084 | 1..822 | 99 | | Minus |