Clone Sequence Records
MXO02424.3prime Sequence
525 bp (525 high quality bases) assembled on 2006-12-21
> MXO02424.3prime
ATGGTCTAGAAAGCTTGCGGGCGTCTCCAGCACATGATTCAAATAGGCAA
TGTAGCAGATGGCCAGCTTGAGGATCTCGATCTTGGAAAGCTTCTTGTCC
GGCGGCAATGTGGGCAACAGCTTGCGCAGCTCGGCAAAGGAAACATTGAA
TGCCTCCACCCGTATACGCTCCCGCGTCGCATGTGCCGTTCGGTATTTGA
GTGTCGCTCGCCTGCGACGACGCCGCTCCTCCCGCGATAGACCCACCAAT
TCCGATGGATCCAAATGGGCAATGGGCGTGGTCCGGCGACGTGGCGCCGG
CGTGGGCGGCGGTGGCGGTGCCGGTTGTGCGGCCGTTTCGCACGCCATTC
GCGCCTGAAAACGCTTATCGATATCCAGCGTCGTACTGGCCGCATAGTCC
TCGTTGACCAGATGCGGATTATTTGGCCCAATCATCTCATCATCGTCGAC
CAGATAGTAGCGACTAAGCGAAATGCTTTGCGGCGGACCCGCCGCCATAT
GGCTCATATCGTAGACCATGTCGAC
MXO02424.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:22:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3052-PA | 504 | HLH4C-RA | 1..501 | 519..19 | 2505 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HLH4C-RB | 1424 | CG3052-RB | 184..684 | 519..19 | 2505 | 100 | Minus |
| HLH4C-RA | 1424 | CG3052-RA | 184..684 | 519..19 | 2505 | 100 | Minus |
| HLH3B-RA | 1428 | CG2655-RA | 616..685 | 140..71 | 230 | 88.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4645867..4646367 | 19..519 | 2505 | 100 | Plus |
| X | 23542271 | X | 2680942..2681011 | 71..140 | 230 | 88.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:10:18 has no hits.
MXO02424.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:26:47 Download gff for
MXO02424.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HLH4C-PA | 1..504 | 16..519 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:26 Download gff for
MXO02424.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3052-PA | 1..504 | 16..519 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:39 Download gff for
MXO02424.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HLH4C-RA | 180..684 | 19..525 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:04 Download gff for
MXO02424.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HLH4C-RA | 180..684 | 19..525 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:04 Download gff for
MXO02424.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4645867..4646371 | 19..525 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:39 Download gff for
MXO02424.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4539900..4540404 | 19..525 | 99 | | Plus |
MXO02424.5prime Sequence
525 bp (525 high quality bases) assembled on 2006-12-21
> MXO02424.5prime
CAGTCGACATGGTCTACGATATGAGCCATATGGCGGCGGGTCCGCCGCAA
AGCATTTCGCTTAGTCGCTACTATCTGGTCGACGATGATGAGATGATTGG
GCCAAATAATCCGCATCTGGTCAACGAGGACTATGCGGCCAGTACGACGC
TGGATATCGATAAGCGTTTTCAGGCGCGAATGGCGTGCGAAACGGCCGCA
CAACCGGCACCGCCACCGCCGCCCACGCCGGCGCCACGTCGCCGGACCAC
GCCCATTGCCCATTTGGATCCATCGGAATTGGTGGGTCTATCGCGGGAGG
AGCGGCGTCGTCGCAGGCGAGCGACACTCAAATACCGAACGGCACATGCG
ACGCGGGAGCGTATACGGGTGGAGGCATTCAATGTTTCCTTTGCCGAGCT
GCGCAAGCTGTTGCCCACATTGCCGCCGGACAAGAAGCTTTCCAAGATCG
AGATCCTCAAGCTGGCCATCTGCTACATTGCCTATTTGAATCATGTGCTG
GAGACGCCCGCAAGCTTTCTAGACC
MXO02424.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:22:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3052-PA | 504 | HLH4C-RA | 1..501 | 9..509 | 2505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HLH4C-RB | 1424 | CG3052-RB | 184..684 | 9..509 | 2505 | 100 | Plus |
| HLH4C-RA | 1424 | CG3052-RA | 184..684 | 9..509 | 2505 | 100 | Plus |
| HLH3B-RA | 1428 | CG2655-RA | 616..685 | 388..457 | 230 | 88.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4645867..4646367 | 509..9 | 2505 | 100 | Minus |
| X | 23542271 | X | 2680942..2681011 | 457..388 | 230 | 88.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:44:41 has no hits.
MXO02424.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:26:49 Download gff for
MXO02424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HLH4C-PA | 1..504 | 9..512 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:27 Download gff for
MXO02424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3052-PA | 1..504 | 9..512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:42 Download gff for
MXO02424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HLH4C-RA | 178..684 | 1..509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:01 Download gff for
MXO02424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| HLH4C-RA | 178..684 | 1..509 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:01 Download gff for
MXO02424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4645867..4646373 | 1..509 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:42 Download gff for
MXO02424.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4539900..4540406 | 1..509 | 99 | | Minus |
