MXO02426.3prime Sequence
876 bp (818 high quality bases) assembled on 2006-12-21
> MXO02426.3prime
ATGGTCTAGAAAGCTTGCCTCATCTTCTCCCACTGAACCCTTTATGATTC
CTTTACCATAATAAGCAGTGAGCGCAACCATTCGGGTGTCCAGATAGTTG
TGCTCCACCTCGCACTGCTGCCCAACTCCACTTAGAGCGACCACCTGCTT
CATATTGGCGTTGCGTGGCAGAAAGAAAGCTACGTCAGATGCCAGGCTAC
GGGACAGCTGCATCAGTTGGCTAGCACCCACGGGCAGGAGACCTGTTTCG
ATATCAAAGGTGGCCTGCTTTTGGTAGTCAGGACCACCCCACGGAGGGCT
CAGGAAAACCACATTTGGGCGCAGCTTTGTGCTGGCCGCAAACTGCAGAA
AATCGGCGTGGATAAACTCGATCTTATGGGCCACACCATAAATGCCGGCA
TTATGCTTGGCCATGGCCAACTTCTCGGCATCGATGTCCACAGCAATTAC
GCGTCCACAGGTGTTTGCAAACTGAATGGCATTGCCGCCGCATCCACAGA
AAGCATCTACGATCACGTCGCAGGCCAGTCGTCGGGCCGTTTGTTTGGCA
ATCTTCTCGGGTGTCACCGAGAACCAGCTCTCGCGGTCCAGCCGAATGCC
CTGATCGAAGCGGGAGAACAGCGAGAATCGCTTGACCCAGTACTTGACCA
TTTTGTTGTTATCCTCTTGCATGCACTCTGGCATCCTGGCCTTGAGTTTT
TTTATTTGCCTTTGCCGTCGTTTTTTCTTTTTAACAGAACCGCTCTGAAC
GCCGTGCAGAGCCTCGTTTTCGTTGTTCTCCATGGTCAACAGATCATGAT
CGTCCTCGCTATCGCTGCTAGATAGTTCGTACTGTGTCTTTCTTTCCTTT
CTATAATAATTATATCTGCCTTCGAC
MXO02426.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:22:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31241-PA | 1476 | CG31241-RA | 635..1473 | 857..19 | 4195 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tgs1-RB | 2089 | CG44890-RB | 1159..2017 | 876..19 | 4270 | 99.9 | Minus |
moi-RA | 2089 | CG42350-RA | 1159..2017 | 876..19 | 4270 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18256747..18257605 | 876..19 | 4245 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:00:37 has no hits.
MXO02426.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:26:54 Download gff for
MXO02426.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31241-PA | 615..1476 | 18..876 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:29 Download gff for
MXO02426.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31241-PA | 615..1476 | 18..876 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:36 Download gff for
MXO02426.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tgs1-RB | 1159..2024 | 11..876 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:02 Download gff for
MXO02426.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
moi-RA | 1159..2024 | 11..876 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:02 Download gff for
MXO02426.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18256747..18257609 | 14..876 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:36 Download gff for
MXO02426.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14082469..14083331 | 14..876 | 99 | -> | Minus |
MXO02426.5prime Sequence
771 bp (765 high quality bases) assembled on 2006-12-21
> MXO02426.5prime
CAGTCGACATGGTACATCCAGGTCATCGACAGAGCCGAGGACTTGCTGAC
TCGCAGGCTGGAGATGAGAAGTCTGATCGAGAAATGAACACACACCACCT
GACCACCTCGCGAACCAATCCGCAGTTCTATATATTCAGTCAGCTCTTTG
GTAACGATTTCGACTGGAATAATTGCAATTGGGGGGGCATTCAAAACGTT
ACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCGAGCAAAA
GTGGCACAAGCGGTTTCCCGAATACAAAGATCTTATCGAGGTGGTTTCGT
CGGAGGAGCAAGGCCTTTGGCAGGAACTGTGGGAGAAGCACGCCAGCGAT
TACAGTGAAAAGTTCTGGTATATATTTAGCTGTGCCTTTGAGAACTACCA
ACACGATTTGGCCAAATCATTTGGCCTTGACGTCGCTGAAAACTCAGAAG
ATGTTGAGGAGGACTTGCAGAACCTAAGCCTTACAAATAAGCCAATAAAA
TCGAAACAGCAAAGGGTCACAGAGAAAGAGGAGGACGAATCATACTTGAC
TGCCAACGACGATCCCGAGGATTGTGACGAGGAACAACAGCTGCGCCTTC
TCGGATTGCCAACATCATTTGCGTCGAAGGCAGATATAATTAATTATAGA
AAGGAAAGAAAGACACAGTACGAACTATCTAGCAGCGATAGCGAGGACGA
TCATGATCTGTTGACCATGGAGAACAACGAANACGAGGCTCTGCACGGCG
TTCAGAGCGGTTCTGTTAAAA
MXO02426.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:22:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31241-PA | 1476 | CG31241-RA | 1..763 | 9..771 | 3796 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Tgs1-RB | 2089 | CG44890-RB | 545..1307 | 9..771 | 3804 | 99.9 | Plus |
moi-RA | 2089 | CG42350-RA | 545..1307 | 9..771 | 3804 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18256133..18256895 | 9..771 | 3804 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:59:56 has no hits.
MXO02426.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:26:55 Download gff for
MXO02426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31241-PA | 1..759 | 9..767 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:29 Download gff for
MXO02426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31241-PA | 1..759 | 9..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:09 Download gff for
MXO02426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tgs1-RB | 536..1303 | 1..767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:39 Download gff for
MXO02426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
moi-RA | 536..1303 | 1..767 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:39 Download gff for
MXO02426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18256124..18256891 | 1..767 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:09 Download gff for
MXO02426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14081846..14082613 | 1..767 | 99 | | Plus |