MXO02429.3prime Sequence
808 bp (591 high quality bases) assembled on 2006-12-21
> MXO02429.3prime
ATGGTCTAGAAAGCTTGCGAACTGCAGCCGCTTCTTCTGGGCCAATCCAT
TGCCCCTCACCGTAGTCTCGACCAGCTTGCGCTTGAGCGCAGGCTTCGTG
TCGCCGGTCTGCGGATTGGCACCCTCCTTGGCGGCCAGAATGGCCGACGG
CATTGGCAACTTGGGACCCACTGTGGGCGCCGGTTTGTTAGCGAAATACG
GCATGCTCAGTGCCTCGCGGCAGGACACACGCCGCAGCGGATTCATGGCA
AACAGGCGTTGCATCAGATGGATCAAGTCATTGCCCGCGGCGGTGAATAT
ATTGTCCAATGGTGTGCCCGGAAAGTTGCGAAACTGCAGATAGTCGTGCA
GTTTGCTCAAATGCGGCCATTCAGCTTCCGTGGGTGTTCCCAGTGTGGAA
AAGATCCGTGTCAGCTGATCCAGATCCGAATCGCCCGGCATGAACGGCAC
TCGCAGCATAAGTTCAGCCAAAATGCAGCCAACTGCCCACATATCCACAC
CGGTGCCATATTGTCGGGCGCCAAAGAGCAATTCGGGCGAACGATACCAG
CGTGTGACCACGTGGTGCGTGTAAATGCGATTGGGCGAACCGAAGGACTT
GGCCAAACCGAAATCGCCAATCTTTAGGATGCCATCGCTGTTGACCAGCA
AATTGTTGGGCTTCAAATCGCGGTGCAGTATCCAATTGAGATGCAAATAC
TCCCGACCCTTTAGCGTCATGATGGGATAGGCCTTGATGTTCGCCTGCGT
TAATATAATCTTGTTATCCTTGATGATCACCCTCAGATCCGTGTCAATGA
AGTCGAAA
MXO02429.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:22:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3319-PA | 1062 | Cdk7-RA | 270..1059 | 808..19 | 3800 | 99.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:04:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cdk7-RA | 1448 | CG3319-RA | 359..1148 | 808..19 | 3860 | 99.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:03:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5307765..5308554 | 19..808 | 3860 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:04:00 has no hits.
MXO02429.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:27:03 Download gff for
MXO02429.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdk7-PA | 273..1062 | 18..805 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:32 Download gff for
MXO02429.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3319-PA | 273..1062 | 18..805 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:48 Download gff for
MXO02429.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdk7-RA | 362..1152 | 13..805 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:43 Download gff for
MXO02429.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cdk7-RA | 362..1152 | 13..805 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:43 Download gff for
MXO02429.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5307761..5308551 | 13..805 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:48 Download gff for
MXO02429.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5201794..5202584 | 13..805 | 98 | | Plus |
