MXO02430.3prime Sequence
371 bp (221 high quality bases) assembled on 2006-12-21
> MXO02430.3prime
ATGGTCTAGAAAGCTTGCAACTCTAAAGTATGGATAGGTTGGTGCAGTGG
TCATCATTGAGCTCTTCTGATCAACCTGATGATGGTAGCCGCTAATATGG
TTGCCTGCGGCAGAAGCGGGAGGGAAAAAGGAACCCGCAAAGTTGTAGCT
GTCCCACGTGGAGGGGTGGTGAGAGCCCGAAGCGGCGGCACATGCAAACT
GGGATCTCAGCTGCTCCGAGGATGTAGCAAGAGTCTGCGGCATCGAATAG
GCAACCCAGGCGAAACTAGCGTTGCTCGATCCCACTCCCCAGGTGCAGGT
CATGAACCCTCTTATAGGTCCTGTTTTTTGTGCTCGCACCTAGACGATCC
GGGTCCTTGGCCACCTGACCA
MXO02430.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:22:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3388-PA | 1284 | gsb-RA | 1047..1275 | 253..25 | 1045 | 98.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gsb-RA | 1649 | CG3388-RA | 1161..1459 | 323..25 | 1165 | 92.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 25064155..25064453 | 323..25 | 1165 | 92.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:39:14 has no hits.
MXO02430.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:27:05 Download gff for
MXO02430.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3388-PA | 1005..1284 | 16..295 | 93 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:32 Download gff for
MXO02430.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3388-PA | 1005..1284 | 16..295 | 93 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:27 Download gff for
MXO02430.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gsb-RA | 1189..1464 | 19..295 | 93 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:46 Download gff for
MXO02430.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gsb-RA | 1189..1464 | 19..295 | 93 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:46 Download gff for
MXO02430.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 25064183..25064458 | 19..295 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:27 Download gff for
MXO02430.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20951706..20951981 | 19..295 | 93 | | Minus |
MXO02430.5prime Sequence
867 bp (748 high quality bases) assembled on 2006-12-21
> MXO02430.5prime
CAGTCGACATGGCTGTTTCGGCTCTCAACATGACACCCTACTTTGGCGGA
TATCCCTTTCAAGGACAAGGTCGTGTCAACCAGTTGGGTGGCGTCTTCAT
CAACGGCCGTCCGTTGCCCAATCACATCCGTCGCCAAATCGTGGAGATGG
CAGCAGCTGGAGTCCGTCCCTGTGTCATCTCCCGCCAGCTGCGCGTCTCT
CATGGCTGCGTCTCAAAGATTCTAAACCGCTTCCAGGAGACTGGCTCCAT
TCGGCCCGGAGTAATCGGTGGCAGCAAGCCCCGTGTAGCCACGCCAGACA
TTGAGTCCAGAATCGAGGAACTTAAACAGTCGCAGCCCGGTATTTTTAGT
TGGGAAATCCGCGCCAAGCTAATCGAAGCGGGAGTCTGCGACAAGCAAAA
TGCTCCGTCGGTGAGCTCTATTTCGCGTCTTCTGCGAGGATCCTCCGGAT
CAGGGACCTCCCACAGCATCGACGGCATCCTCGGCGGAGGCGCTGGTTCT
GTGGGAAGCGAGGATGAGAGCGAGGACGATGCCGAGCCCAGTGTGCAGTT
AAAAAGGAAACAAAGGCGTTCCCGGACGACATTCTCCAACGACCAGATCG
ACGCCCTAGAGCGCATCTTCGCCCGTACACAGTACCCCGATGTCTACACC
CGGGAGGAGTTGGCCCAGAGCACGGGATTGACCGAGGCCCGTGTCCAAGT
TTGGTTCTCTAATCGCCGTGCTCGTCTGCGCAAGCAACTGAACACCCAGC
AGGTGCCTAGCTTTGCTCCCACATCTACTTCTTTTGGCGCAACTCCCACT
ACCAGTGCCGCCCCTGCTCCAAACATGGGAATGAGCCTTTACAGTTCACA
GAGCTGGCCATCATCCG
MXO02430.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:22:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3388-PA | 1284 | gsb-RA | 1..859 | 9..867 | 4295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gsb-RA | 1649 | CG3388-RA | 185..1043 | 9..867 | 4295 | 100 | Plus |
gsb-n-RA | 2237 | CG2692-RA | 369..589 | 51..271 | 460 | 81.6 | Plus |
prd-RB | 2459 | CG6716-RB | 401..633 | 87..319 | 415 | 78.5 | Plus |
gsb-n-RA | 2237 | CG2692-RA | 876..1042 | 570..736 | 220 | 75.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 25063228..25064037 | 58..867 | 4035 | 99.9 | Plus |
2L | 23513712 | 2L | 12084821..12085053 | 319..87 | 415 | 78.5 | Minus |
2R | 25286936 | 2R | 25051416..25051625 | 271..62 | 405 | 79.5 | Minus |
2R | 25286936 | 2R | 25062148..25062203 | 9..64 | 280 | 100 | Plus |
2R | 25286936 | 2R | 25041692..25041858 | 736..570 | 220 | 75.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:45:07 has no hits.
MXO02430.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:27:07 Download gff for
MXO02430.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3388-PA | 1..859 | 9..867 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:32 Download gff for
MXO02430.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3388-PA | 1..859 | 9..867 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:53 Download gff for
MXO02430.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gsb-RA | 178..1043 | 1..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:11 Download gff for
MXO02430.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gsb-RA | 178..1043 | 1..867 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:11 Download gff for
MXO02430.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 25062141..25062202 | 1..63 | 93 | -> | Plus |
2R | 25063234..25064037 | 64..867 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:53 Download gff for
MXO02430.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20949664..20949725 | 1..63 | 93 | -> | Plus |
arm_2R | 20950757..20951560 | 64..867 | 100 | | Plus |