MXO02435.3prime Sequence
861 bp (844 high quality bases) assembled on 2006-12-21
> MXO02435.3prime
ATGGTCTAGAAAGCTTGCCACTGTCTGCTTCTGGAACCACTGAGTGCCAT
CGGTAGGAAGAGGACTTGAGATCGTTGGAGAGAAAAAAATCCAGAAGCGC
CGTTTTCCCAAGACCATATCAAAATTTCTTCTCCAACCAACATCATAGCT
GCGATCGAGCATCTTATAGCATGTACTATTCCGATATACCATTATCATTT
GAAAGACGAACATGAAGAGGGGGACGCCAAAAAGAAATAAATTCAGTTTG
AAAAGGTTGGCGATTGTGTACTTCCATTTGAAATCAGCATCTTGGGTTGT
ATCCTGGAACATTAGCAACAAAGGATCGACGACCAAAAAGGCCTTGTTTG
TCCAATTCAAAATGCCATTGTAGACGAGCGCCTGTCCGCTGCCAAAGCTC
AGGTGAAACAAGAAGGCAAGGAAATACCTCTGATTTTTATGGCCAATGCA
ACTGGCAAAGAAGGTGCAGTGGTGATCCCGCTTCAGAATGCAAATGTTGC
ACAAACTACAGTGCCAGGACCTCGGTGGCACCAGCTTTTGGCATGTGGAG
CAGTAGTGCCACAGGTGAGCCTCACCTGCCACAGGATACTGTCTTTCCAG
AACTAAGCTATCGACTGAGGTATTGGTCATACAGCCGAGCCACCAGTTGC
CCAATATATTGATGACTGTATAAATTCCCATAAACCAACACAATTTGTGC
CATATACCATGGGGATCAGTTATTTGCGGCAAAACGTAGCATAATTCATA
GACAAACAGCAATCCAATCAGACAGAGTAAAAATATTGCACAAAACGGAT
GAAGTAGGCCCATAACTTTTATGCGATGTAGTTGAAAGTGACGATGAAAC
CCTTCCTCGGC
MXO02435.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:23:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4956-PA | 909 | CG4956-RA | 64..906 | 861..19 | 4215 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:04:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4956-RA | 1038 | CG4956-RA | 140..982 | 861..19 | 4215 | 100 | Minus |
CG17197-RB | 1958 | CG17197-RB | 429..531 | 530..428 | 215 | 80.6 | Minus |
CG17198-RB | 1958 | CG17198-RB | 429..531 | 530..428 | 215 | 80.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:04:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25777324..25778166 | 19..861 | 4215 | 100 | Plus |
3R | 32079331 | 3R | 25774839..25774941 | 428..530 | 215 | 80.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:04:07 has no hits.
MXO02435.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:27:21 Download gff for
MXO02435.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4956-PA | 64..909 | 15..861 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:36 Download gff for
MXO02435.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4956-PA | 64..909 | 15..861 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:52 Download gff for
MXO02435.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4956-RA | 140..989 | 10..861 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:48 Download gff for
MXO02435.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4956-RA | 140..989 | 10..861 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:48 Download gff for
MXO02435.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25777316..25778166 | 10..861 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:52 Download gff for
MXO02435.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21603038..21603888 | 10..861 | 99 | | Plus |
MXO02435.5prime Sequence
803 bp (672 high quality bases) assembled on 2006-12-21
> MXO02435.5prime
CAGTCGACATGCTTCGATTTCGAGTTTTATTAAGATCTACTTGCGGTTGG
AGTAGAAGAATGTGTTTTCGAGCCGAGGAAGGGTTTCATCGTCACTTTCA
ACTACATCGCATAAAAGTTATGGGCCTACTTCATCCGTTTTGTGCAATAT
TTTTACTCTGTCTGATTGGATTGCTGTTTGTCTATGAATTATGCTACGTT
TTGCCGCAAATAACTGATCCCCATGGTATATGGCACAAATTGTGTTGGTT
TATGGGAATTTATACAGTCATCAATATATTGGGCAACTGGTGGCTCGGCT
GTATGACCAATACCTCAGTCGATAGCTTAGTTCTGGAAAGACAGTATCCT
GTGGCAGGTGAGGCTCACCTGTGGCACTACTGCTCCACATGCCAAAAGCT
GGTGCCACCGAGGTCCTGGCACTGTAGTTTGTGCAACATTTGCATTCTGA
AGCGGGATCACCACTGCACCTTCTTTGCCAGTTGCATTGGCCATAAAAAT
CAGAGGTATTTCCTTGCCTTCTTGTTTCACCTGAGCTTTGGCAGCGGACA
GGCGCTCGTCTACAATGGCATTTTGAATTGGACAAACAAGGCCTTTTTGG
TCGTCGATCCTTTGTTGCTAATGTTCCAGGATACAACCCAAGATGCTGAT
TTCAAATGGAAGTACACAATCGCCAACCTTTTCAGACTGAATTTATTTCT
TTTTGGCGTCCCCCTCTTCATGTTCGTCTTTCAAATGATAATGGAATATC
GGAATAGTACATGCTATAAGATGCTCGATCGCAGCTATGATGTTGGTTGG
AGA
MXO02435.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:23:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4956-PA | 909 | CG4956-RA | 1..795 | 9..803 | 3925 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4956-RA | 1038 | CG4956-RA | 77..871 | 9..803 | 3945 | 99.7 | Plus |
CG17197-RB | 1958 | CG17197-RB | 429..531 | 403..505 | 215 | 80.6 | Plus |
CG17198-RB | 1958 | CG17198-RB | 429..531 | 403..505 | 215 | 80.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 25777435..25778229 | 803..9 | 3945 | 99.7 | Minus |
3R | 32079331 | 3R | 25774839..25774941 | 505..403 | 215 | 80.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:00:31 has no hits.
MXO02435.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:27:23 Download gff for
MXO02435.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4956-PA | 1..794 | 9..802 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:37 Download gff for
MXO02435.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4956-PA | 1..794 | 9..802 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:32 Download gff for
MXO02435.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4956-RA | 77..870 | 9..802 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:59 Download gff for
MXO02435.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4956-RA | 77..870 | 9..802 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:59 Download gff for
MXO02435.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 25777436..25778229 | 9..802 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:32 Download gff for
MXO02435.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21603158..21603951 | 9..802 | 99 | | Minus |