MXO02444.3prime Sequence
835 bp (809 high quality bases) assembled on 2006-12-21
> MXO02444.3prime
ATGGTCTAGAAAGCTTGCTTTATTCTGTCGATTTGGCTCCGTGTAAAGCT
GCACGCCTTCCACGGTGAAAATTGAGGTTTCGTCTGGCAATTCGTAGAGT
TTCTTTGGCAACTGCGCAAAGTACGGATGCTGCAGTGCATCATCGGCGCC
CAAACGCTGCTCCGGATTCAGTTGCAGGAAGCCGTTAGCTATCGTCTCGC
CCTCGATGATGTCGTATAGCCGTGGGAAGTTGTGACCCAGTTTCCGTGGT
CGATAGAAACCCAGCTTGTGTGGCTTGTAGCCGGGAAAGTGGGTGACTCC
CGGCCACGTGTCCTCGGTGGGCGTGCCCAGCAATTTGAATATCTTGTCCA
GCTGATCGTAGGTATCACGTATGCCCGGAAACGTCGGCATCCCGGTCACC
ATCTCCACGAAGATGCAGCCCACGCCCCACATGTCCAGCGAGGTCGAGTA
CTCCGTGCTGCCCAGCAGGACATCTGGAGGGCGGTACCATAACGTGACCA
CCTCGTGGGAGTAGGTGTGGCTGGGCACGCTCTTGGCCCTGGCCAGTCCG
AAATCGGCCAACTTCAGTTCGCCGCAGTCGCTAATAAGCAGGTTCTGCGG
CTTGACATCCCGATGGAGGACACGCCGCTTGTGGCAGTAGGAGAGTCCAC
GGAGCAGCTGGAAGAGGAACAGGCGCACGTTGCGATGATCCAGGCCGCCC
GGATGCTTCTCCATGTATTGCGACAGATCCGTATTCACATATTCAAAGAC
AAAGGTCAGCGTCTCGCGCGTGTGGACAATGTCGTGCAGCGTGACGATGT
TGCTGTGTTTCAATTCTTTCAGCAGCGAGGCCTCG
MXO02444.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:23:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10579-PF | 1530 | Eip63E-RF | 711..1527 | 835..19 | 4060 | 99.8 | Minus |
| CG10579-PG | 1569 | Eip63E-RG | 750..1566 | 835..19 | 4060 | 99.8 | Minus |
| CG10579-PH | 1506 | Eip63E-RH | 687..1503 | 835..19 | 4060 | 99.8 | Minus |
| CG10579-PI | 1569 | Eip63E-RI | 750..1566 | 835..19 | 4060 | 99.8 | Minus |
| CG10579-PJ | 1530 | Eip63E-RJ | 711..1527 | 835..19 | 4060 | 99.8 | Minus |
| CG10579-PK | 1569 | Eip63E-RK | 750..1566 | 835..19 | 4060 | 99.8 | Minus |
| CG10579-PD | 1569 | Eip63E-RD | 750..1566 | 835..19 | 4060 | 99.8 | Minus |
| CG10579-PE | 1569 | Eip63E-RE | 750..1566 | 835..19 | 4060 | 99.8 | Minus |
| CG10579-PA | 1530 | Eip63E-RA | 711..1527 | 835..19 | 4060 | 99.8 | Minus |
| CG10579-PB | 1530 | Eip63E-RB | 711..1527 | 835..19 | 4060 | 99.8 | Minus |
| CG10579-PC | 1530 | Eip63E-RC | 711..1527 | 835..19 | 4060 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip63E-RL | 3311 | CG10579-RL | 1509..2325 | 835..19 | 4070 | 99.9 | Minus |
| Eip63E-RN | 3575 | CG10579-RN | 1773..2589 | 835..19 | 4070 | 99.9 | Minus |
| Eip63E-RM | 4914 | CG10579-RM | 1140..1956 | 835..19 | 4070 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3598359..3598621 | 736..474 | 1315 | 100 | Minus |
| 3L | 28110227 | 3L | 3600010..3600227 | 476..259 | 1090 | 100 | Minus |
| 3L | 28110227 | 3L | 3600311..3600491 | 261..81 | 905 | 100 | Minus |
| 3L | 28110227 | 3L | 3598140..3598239 | 835..736 | 485 | 99 | Minus |
| 3L | 28110227 | 3L | 3607501..3607563 | 81..19 | 315 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:58:02 has no hits.
MXO02444.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:27:51 Download gff for
MXO02444.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10579-PC | 711..1530 | 16..835 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:44 Download gff for
MXO02444.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10579-PC | 711..1530 | 16..835 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:03 Download gff for
MXO02444.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip63E-RM | 1140..1964 | 11..835 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:54 Download gff for
MXO02444.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip63E-RM | 1140..1964 | 11..835 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:54 Download gff for
MXO02444.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3598140..3598239 | 736..835 | 99 | -> | Minus |
| 3L | 3598360..3598621 | 474..735 | 100 | -> | Minus |
| 3L | 3600013..3600225 | 261..473 | 100 | -> | Minus |
| 3L | 3600312..3600491 | 81..260 | 100 | -> | Minus |
| 3L | 3607502..3607571 | 11..80 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:03 Download gff for
MXO02444.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3598140..3598239 | 736..835 | 99 | -> | Minus |
| arm_3L | 3598360..3598621 | 474..735 | 100 | -> | Minus |
| arm_3L | 3600013..3600225 | 261..473 | 100 | -> | Minus |
| arm_3L | 3600312..3600491 | 81..260 | 100 | -> | Minus |
| arm_3L | 3607502..3607571 | 11..80 | 94 | | Minus |
MXO02444.5prime Sequence
853 bp (831 high quality bases) assembled on 2006-12-21
> MXO02444.5prime
CAGTCGACATGGCCGAATTAATCAGTCAGCCCACTAAAATTAACAACAAT
AATTTTGGTGCCGGCGTCACAATGCGCGAGAAAAAGGGAGGAGCCCTTCA
GAAGCTCAAGAAGAGACTTTCGCACAGCTTCGGCAGATTAACAATTTCCC
GCGAAGATGGCGACGAGTCGACGCACCACCATCACCACCACCATCATCAT
CGCGGTGGACATGGCGGGCACCACAACCACGGTAACAAAGTTCCATACAA
CGGCTACAATTCGGAGGAATACTTGGACCGACTCGAACCGAATGGCAATA
TACCCGCTGACAAGACAAATTGCAGATATGGAGACTGGCGCAGCACGGAC
AGCACCGACCACCACGATCGCGTCCAGAGACAGCTTTCCGTGTCCTCCGA
CAGCAAGTTGCTCGACGAGGACATTCGCGAGGAGATGAAGTACCATTCGC
ACGTGGTCATGCGTCCCAAGAAGCCGCCCAGACCCAAATCCGAGGTCTTT
CTGAACAAACAGGAAACGCATCCGCGCCGGAAACGATTCAGTGCATTTGG
TGGCGACTCCCCATTTGGCAAGCAGGAGGCCTATGTTAAACTCGAGCCGC
TGGGCGAAGGCTCCTATGCGACGGTCTACAAAGGATTTAGCAAATTAACC
TACCAGCGGGTGGCGCTGAAGGAGATTCGCCTGCAGGAGGAGGAGGGAGC
ACCCTTCACCGCGATTCGCGAGGCCTCGCTGCTGAAAGAACTGAAACACA
GCAACATCGTCACGCTGCACGACATTGTCCACACGCGCGAGACGCTGACC
TTTGTCTTTGAATATGTGAATACGGATCTGTCGCAATACATGGAGAAGCA
TCC
MXO02444.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:23:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10579-PJ | 1530 | Eip63E-RJ | 1..845 | 9..853 | 4225 | 100 | Plus |
| CG10579-PA | 1530 | Eip63E-RA | 1..845 | 9..853 | 4225 | 100 | Plus |
| CG10579-PB | 1530 | Eip63E-RB | 1..845 | 9..853 | 4225 | 100 | Plus |
| CG10579-PC | 1530 | Eip63E-RC | 1..845 | 9..853 | 4225 | 100 | Plus |
| CG10579-PF | 1530 | Eip63E-RF | 55..845 | 63..853 | 3955 | 100 | Plus |
| CG10579-PG | 1569 | Eip63E-RG | 363..884 | 332..853 | 2610 | 100 | Plus |
| CG10579-PI | 1569 | Eip63E-RI | 363..884 | 332..853 | 2610 | 100 | Plus |
| CG10579-PK | 1569 | Eip63E-RK | 363..884 | 332..853 | 2610 | 100 | Plus |
| CG10579-PD | 1569 | Eip63E-RD | 363..884 | 332..853 | 2610 | 100 | Plus |
| CG10579-PE | 1569 | Eip63E-RE | 363..884 | 332..853 | 2610 | 100 | Plus |
| CG10579-PH | 1506 | Eip63E-RH | 300..821 | 332..853 | 2610 | 100 | Plus |
| CG10579-PG | 1569 | Eip63E-RG | 1..325 | 9..333 | 1625 | 100 | Plus |
| CG10579-PI | 1569 | Eip63E-RI | 1..325 | 9..333 | 1625 | 100 | Plus |
| CG10579-PK | 1569 | Eip63E-RK | 1..325 | 9..333 | 1625 | 100 | Plus |
| CG10579-PD | 1569 | Eip63E-RD | 55..325 | 63..333 | 1355 | 100 | Plus |
| CG10579-PE | 1569 | Eip63E-RE | 55..325 | 63..333 | 1355 | 100 | Plus |
| CG10579-PH | 1506 | Eip63E-RH | 1..262 | 72..333 | 1310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:03:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip63E-RC | 2891 | CG10579-RC | 377..1223 | 7..853 | 4235 | 100 | Plus |
| Eip63E-RB | 2919 | CG10579-RB | 405..1251 | 7..853 | 4235 | 100 | Plus |
| Eip63E-RA | 2700 | CG10579-RA | 186..1032 | 7..853 | 4235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:03:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3593327..3593547 | 332..552 | 1105 | 100 | Plus |
| 3L | 28110227 | 3L | 3578289..3578480 | 142..333 | 960 | 100 | Plus |
| 3L | 28110227 | 3L | 3598061..3598239 | 640..818 | 880 | 99.4 | Plus |
| 3L | 28110227 | 3L | 3594651..3594742 | 552..643 | 460 | 100 | Plus |
| 3L | 28110227 | 3L | 3552786..3552864 | 63..141 | 395 | 100 | Plus |
| 3L | 28110227 | 3L | 3546075..3546132 | 7..64 | 290 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:03:21 has no hits.
MXO02444.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:27:53 Download gff for
MXO02444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10579-PA | 1..845 | 9..853 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:44 Download gff for
MXO02444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10579-PB | 1..845 | 9..853 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:23 Download gff for
MXO02444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip63E-RA | 186..1032 | 7..853 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:27 Download gff for
MXO02444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip63E-RA | 186..1032 | 7..853 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:27 Download gff for
MXO02444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3546070..3546131 | 1..63 | 95 | -> | Plus |
| 3L | 3552787..3552864 | 64..141 | 100 | -> | Plus |
| 3L | 3578289..3578480 | 142..333 | 100 | -> | Plus |
| 3L | 3593329..3593546 | 334..551 | 100 | -> | Plus |
| 3L | 3594651..3594742 | 552..643 | 100 | -> | Plus |
| 3L | 3598065..3598239 | 644..818 | 100 | -> | Plus |
| 3L | 3598360..3598394 | 819..853 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:23 Download gff for
MXO02444.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3546070..3546131 | 1..63 | 95 | -> | Plus |
| arm_3L | 3552787..3552864 | 64..141 | 100 | -> | Plus |
| arm_3L | 3578289..3578480 | 142..333 | 100 | -> | Plus |
| arm_3L | 3593329..3593546 | 334..551 | 100 | -> | Plus |
| arm_3L | 3594651..3594742 | 552..643 | 100 | -> | Plus |
| arm_3L | 3598065..3598239 | 644..818 | 100 | -> | Plus |
| arm_3L | 3598360..3598394 | 819..853 | 100 | | Plus |
