MXO02445.3prime Sequence
582 bp (582 high quality bases) assembled on 2006-12-21
> MXO02445.3prime
ATGGTCTAGAAAGCTTGCCCAGGGACGCCACACCTGTCCGGGGCTGCTGA
TCTGGAGCAGAGACTCGTTGTCGCTGGCATATCCACTGGAAACGGGACTG
ATGGAGGAGCAGGAGCTGGCACTGGAGTAGGTGCTGGAGCTAGAGCTGGA
TCCACAGACGATACTGAGTGGAGTGTTGACGGCTTGCGGTTGTTCCATGG
GCTGCTCCAGTTGGTTGAGACGCATGCCCAGATGGGTCATCAGTGTGGTT
CCAAAAGCCACATCCACTCGGGGAAGGGAGGCCAGGGCGCGGGACACTTC
GTTGGCTGCCCGGATGTATCCAGCACGGAAACTCTGTTCGGGATTGGCCG
GAACATGCTTCTTAGACTCTTTCAGCTTGCGGAGATGCTGCACGGTGACT
TCCAGGATGTCGGCCTTCTCGAATTTGGCATCGCCAGTCTGAGCAACGCA
CTCGGCCATCAGATCCTTGAGCTCGTCCAGGCACTTGTTGATCCTGGCAC
GACGCTTCCGCTCCAGCAAGGGCTTCATCACCTTGCGGTACTGATAGGTT
TTCGACATCTCGTATTTGGTGGCCATGTCGAC
MXO02445.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:23:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8361-PA | 561 | HLHm7-RA | 1..558 | 576..19 | 2790 | 100 | Minus |
CG8333-PA | 618 | HLHmgamma-RA | 21..122 | 562..461 | 360 | 94.1 | Minus |
CG14548-PA | 588 | HLHmbeta-RA | 16..113 | 561..464 | 340 | 93.8 | Minus |
CG8346-PA | 675 | HLHm3-RA | 25..115 | 546..456 | 255 | 91.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(spl)m7-HLH-RA | 982 | CG8361-RA | 126..683 | 576..19 | 2790 | 100 | Minus |
E(spl)mgamma-HLH-RA | 911 | CG8333-RA | 113..219 | 562..456 | 430 | 93.5 | Minus |
E(spl)mbeta-HLH-RA | 978 | CG14548-RA | 146..259 | 561..448 | 405 | 90.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26037163..26037720 | 576..19 | 2790 | 100 | Minus |
3R | 32079331 | 3R | 25999963..26000069 | 562..456 | 430 | 93.5 | Minus |
3R | 32079331 | 3R | 26005765..26005878 | 448..561 | 405 | 90.4 | Plus |
3R | 32079331 | 3R | 26022029..26022142 | 561..448 | 375 | 88.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:08:17 has no hits.
MXO02445.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:27:55 Download gff for
MXO02445.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HLHm7-PA | 1..561 | 15..576 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:45 Download gff for
MXO02445.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8361-PA | 1..561 | 15..576 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:01 Download gff for
MXO02445.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)m7-HLH-RA | 120..686 | 15..582 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:43 Download gff for
MXO02445.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)m7-HLH-RA | 120..686 | 15..582 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:43 Download gff for
MXO02445.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26037157..26037719 | 20..582 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:01 Download gff for
MXO02445.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21862879..21863441 | 20..582 | 99 | -> | Minus |
MXO02445.5prime Sequence
582 bp (582 high quality bases) assembled on 2006-12-21
> MXO02445.5prime
CAGTCGACATGGCCACCAAATACGAGATGTCGAAAACCTATCAGTACCGC
AAGGTGATGAAGCCCTTGCTGGAGCGGAAGCGTCGTGCCAGGATCAACAA
GTGCCTGGACGAGCTCAAGGATCTGATGGCCGAGTGCGTTGCTCAGACTG
GCGATGCCAAATTCGAGAAGGCCGACATCCTGGAAGTCACCGTGCAGCAT
CTCCGCAAGCTGAAAGAGTCTAAGAAGCATGTTCCGGCCAATCCCGAACA
GAGTTTCCGTGCTGGATACATCCGGGCAGCCAACGAAGTGTCCCGCGCCC
TGGCCTCCCTTCCCCGAGTGGATGTGGCTTTTGGAACCACACTGATGACC
CATCTGGGCATGCGTCTCAACCAACTGGAGCAGCCCATGGAACAACCGCA
AGCCGTCAACACTCCACTCAGTATCGTCTGTGGATCCAGCTCTAGCTCCA
GCACCTACTCCAGTGCCAGCTCCTGCTCCTCCATCAGTCCCGTTTCCAGT
GGATATGCCAGCGACAACGAGTCTCTGCTCCAGATCAGCAGCCCCGGACA
GGTGTGGCGTCCCTGGGCAAGCTTTCTAGACC
MXO02445.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:23:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8361-PA | 561 | HLHm7-RA | 1..558 | 9..566 | 2790 | 100 | Plus |
CG8333-PA | 618 | HLHmgamma-RA | 21..122 | 23..124 | 360 | 94.1 | Plus |
CG14548-PA | 588 | HLHmbeta-RA | 16..113 | 24..121 | 340 | 93.8 | Plus |
CG8346-PA | 675 | HLHm3-RA | 25..115 | 39..129 | 255 | 91.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(spl)m7-HLH-RA | 982 | CG8361-RA | 126..683 | 9..566 | 2790 | 100 | Plus |
E(spl)mgamma-HLH-RA | 911 | CG8333-RA | 113..219 | 23..129 | 430 | 93.5 | Plus |
E(spl)mbeta-HLH-RA | 978 | CG14548-RA | 146..259 | 24..137 | 405 | 90.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26037163..26037720 | 9..566 | 2790 | 100 | Plus |
3R | 32079331 | 3R | 25999963..26000069 | 23..129 | 430 | 93.5 | Plus |
3R | 32079331 | 3R | 26005765..26005878 | 137..24 | 405 | 90.4 | Minus |
3R | 32079331 | 3R | 26022029..26022142 | 24..137 | 375 | 88.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:45:33 has no hits.
MXO02445.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:27:56 Download gff for
MXO02445.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
HLHm7-PA | 1..561 | 9..570 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:45 Download gff for
MXO02445.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8361-PA | 1..561 | 9..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:12 Download gff for
MXO02445.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)m7-HLH-RA | 120..686 | 1..570 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:24 Download gff for
MXO02445.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)m7-HLH-RA | 120..686 | 1..570 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:24 Download gff for
MXO02445.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26037157..26037719 | 1..565 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:12 Download gff for
MXO02445.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21862879..21863441 | 1..565 | 99 | -> | Plus |