Clone Sequence Records
MXO02446.3prime Sequence
489 bp (489 high quality bases) assembled on 2006-12-21
> MXO02446.3prime
ATGGTCTAGAAAGCTTGCAAAGTTCATGGCTCCATCAAGGAATAGCAAAC
TGTCCACAGCAGAAATGGCCATATCCACGTCCCTCTTTTGTATGGTTTTC
TTTTTGGACTGCGCCGTGTAGGTATATGATTCCCGTGACAACGAGGCTAT
GAATAGTTCCACTGCCTTCGCCACTATGAACACGGCCTCATTGTTGGCCA
TATGCAGATCCGGATCTAGTTTCATTATGTTCCGTATCCTGGCCAACGGC
AGTTGTGTCATCTTGGCTTCGTTATCAGCAGGGGCCTTGTTGCCATTCGT
CACTGGTTTTTCTGTCAATTGTTCTGTTGTAGATTCTGCCTCAGGATTAT
CCGGCGATTCCTCGGTGATTTCCAAAGGCTCTTCTGTTTCCGCTAGCTCC
GCCTCCTCAGTCTCCATGGCCTGCTGATGCTCCAAGTCCTGTTCTTCCGA
GAATTCAGCCTCAAATAGTTCCTCGCTGGCCATGTCGAC
MXO02446.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:23:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11301-PA | 468 | Mes4-RA | 1..465 | 483..19 | 2325 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mes4-RB | 740 | CG11301-RB | 66..530 | 483..19 | 2325 | 100 | Minus |
| Mes4-RA | 683 | CG11301-RA | 66..530 | 483..19 | 2325 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22412085..22412372 | 306..19 | 1440 | 100 | Minus |
| 2R | 25286936 | 2R | 22411854..22412034 | 483..303 | 905 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:25:07 has no hits.
MXO02446.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:27:58 Download gff for
MXO02446.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mes4-PA | 1..468 | 16..483 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:46 Download gff for
MXO02446.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11301-PA | 1..468 | 16..483 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:37 Download gff for
MXO02446.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mes4-RA | 59..534 | 15..489 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:17 Download gff for
MXO02446.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mes4-RA | 59..534 | 15..489 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:17 Download gff for
MXO02446.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22411847..22412034 | 303..489 | 98 | -> | Minus |
| 2R | 22412089..22412376 | 15..302 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:37 Download gff for
MXO02446.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18299352..18299539 | 303..489 | 98 | -> | Minus |
| arm_2R | 18299594..18299881 | 15..302 | 99 | | Minus |
MXO02446.5prime Sequence
489 bp (489 high quality bases) assembled on 2006-12-21
> MXO02446.5prime
CAGTCGACATGGCCAGCGAGGAACTATTTGAGGCTGAATTCTCGGAAGAA
CAGGACTTGGAGCATCAGCAGGCCATGGAGACTGAGGAGGCGGAGCTAGC
GGAAACAGAAGAGCCTTTGGAAATCACCGAGGAATCGCCGGATAATCCTG
AGGCAGAATCTACAACAGAACAATTGACAGAAAAACCAGTGACGAATGGC
AACAAGGCCCCTGCTGATAACGAAGCCAAGATGACACAACTGCCGTTGGC
CAGGATACGGAACATAATGAAACTAGATCCGGATCTGCATATGGCCAACA
ATGAGGCCGTGTTCATAGTGGCGAAGGCAGTGGAACTATTCATAGCCTCG
TTGTCACGGGAATCATATACCTACACGGCGCAGTCCAAAAAGAAAACCAT
ACAAAAGAGGGACGTGGATATGGCCATTTCTGCTGTGGACAGTTTGCTAT
TCCTTGATGGAGCCATGAACTTTGCAAGCTTTCTAGACC
MXO02446.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:23:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11301-PA | 468 | Mes4-RA | 1..465 | 9..473 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:03:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mes4-RB | 740 | CG11301-RB | 66..530 | 9..473 | 2325 | 100 | Plus |
| Mes4-RA | 683 | CG11301-RA | 66..530 | 9..473 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:03:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22412085..22412372 | 186..473 | 1440 | 100 | Plus |
| 2R | 25286936 | 2R | 22411854..22412034 | 9..189 | 905 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:03:32 has no hits.
MXO02446.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:27:59 Download gff for
MXO02446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mes4-PA | 1..468 | 9..476 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:46 Download gff for
MXO02446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11301-PA | 1..468 | 9..476 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:30 Download gff for
MXO02446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mes4-RA | 57..534 | 1..477 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:31 Download gff for
MXO02446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mes4-RA | 57..534 | 1..477 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:31 Download gff for
MXO02446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22411845..22412034 | 1..189 | 97 | -> | Plus |
| 2R | 22412089..22412376 | 190..477 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:30 Download gff for
MXO02446.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18299350..18299539 | 1..189 | 97 | -> | Plus |
| arm_2R | 18299594..18299881 | 190..477 | 99 | | Plus |
