MXO02455.5prime Sequence
668 bp (490 high quality bases) assembled on 2006-12-21
> MXO02455.5prime
CAGTCGACTTGGGTCGCAAATTCCAGAATAAGAAAAAGAAGGCCGCGCCG
CAGCTGGAGATAGTGCCGCTGGATGAAAATCCACCACTGCCGCCACAGAG
ATCGTCAGATGATGTGGTGCCCAAAAAGGAAAAATGGGTGAACAAACAGC
GCGTGCTGGTCTTCTCCGCCCGCGGTATTAGCCACCGGGACCGGCTCTTA
ATGAAGGATATTAAGACCCTAATGCCGCACCACCGACCCGAATCCAAAAT
GGAGCGCTCCAAAACCTTGTCGGTGGTCAACGAAATGTGCGAAATGAAGC
ACTGCAACAAGGCGATGCTGTTCGAGGGACGCCGGAAAAGGGATCTGTAC
ATGTGGATATCCAACACCTCGGGATCGACTGGTCCATCCGCTAAATTCCT
CATCGAAAACATTCATACAATGGCCGAACTGAAGATGACGGGAAACTGCT
TGCGGGGATCACGTCCGCTGCTCTCGTTTGACTCCAAATTCGACGAGCTG
CCGCACCTTACGCTGCTCAAGGAGCTGTTCGTGCACACCTACTCCGTGCC
CAGCCATCGTCCCAAGAGCCAGCCCTTCGTCGATCACGTTTTCACCTTCA
CCTACCTGGACAAACGCATCTGGTTCAGATATTTCCAGATTCTATCCGAA
GATGGCGGCTTGTCCGAA
MXO02455.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:23:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11583-PA | 1071 | CG11583-RA | 2..660 | 10..668 | 3120 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:12:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11583-RA | 1253 | CG11583-RA | 90..748 | 10..668 | 3190 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:12:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4282009..4282550 | 668..127 | 2605 | 98.7 | Minus |
3L | 28110227 | 3L | 4282609..4282728 | 129..10 | 600 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:12:23 has no hits.
MXO02455.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:28:29 Download gff for
MXO02455.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32253-PA | 2..658 | 10..666 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:53 Download gff for
MXO02455.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11583-PA | 2..658 | 10..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:37 Download gff for
MXO02455.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11583-RA | 90..748 | 10..668 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:09 Download gff for
MXO02455.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11583-RA | 90..748 | 10..668 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:09 Download gff for
MXO02455.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4282009..4282548 | 129..668 | 98 | <- | Minus |
3L | 4282610..4282728 | 10..128 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:37 Download gff for
MXO02455.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4282009..4282548 | 129..668 | 98 | <- | Minus |
arm_3L | 4282610..4282728 | 10..128 | 100 | | Minus |
MXO02455.3prime Sequence
849 bp (810 high quality bases) assembled on 2006-12-21
> MXO02455.3prime
ATGGTCTAGAAAGCTTGCAACCTTTTTCACGCGTTTAATGGTTCTTGCCT
TCTTTCTTTCAATCACATCTTTCACGGCCTGCAGTTGTTTCTCCTTGATC
TTCTTGGTCAGCGCCGATTTGGGTGTCTGTTTGGCGGCTTCCTCCTTCTT
CTTTTTGGCTATCGCAGCCAGTATCTTGGCCGTCTCCACGGGATCATCGT
CCTCGAATAGCTCATCGTTATCCATGCCATCGTAGGCTCTAATAGGTCGC
GTGGCCTCGTGCTTGACCTTTTGCTCCACTCGGTTCACGTACTTATCCTT
GGCAGCCTTCTTAAGTACCTGCCGCTGTTTGGATGGACTCACGTAGTCCG
GATTCTCCCAAATGGTTTTGCCAGTGAAGGAACCATCGAATATTTTTACA
GGATTCATCACGTAACGCGGCCCGACTTCGGACAAACCGCCATCTTCGGA
TAGAATCTGGAAATTTCTGAACCAGATGCGTTTGTCCAGGTAGGTGAAGG
TGAAAACGTGATCGACGAAGGGCTGGCTCTTGGGATGATGGTTGGGCACG
GAGTAGGTCTGCACGAACAGCTCCTTGAGCAGCTTAAGGTGCGGCAGCTC
GTCGAATTTGGAGTCAAACGAGAGCAGCGGACGTGATCCCCGCAAGCAGT
TTCCCGTCATCTTCAGTTCGGCCATTGTATGAATGTTTTCGATGAGGAAT
TTAGCGGATGGACCAGTCGATCCCGAGGTGTTGGATATCCACATGTACAG
ATCCCTTTTCCGGCGTCCCTCGAACAGCATCGCCTTGTTGCAGTGCTTCA
TTTCGCACATTTCGTTGACCACCGACAAGGTTTTGGAGCGCTCCATTTT
MXO02455.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:23:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11583-PA | 1071 | CG11583-RA | 238..1068 | 849..19 | 4155 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11583-RA | 1253 | CG11583-RA | 326..1156 | 849..19 | 4155 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4281601..4282431 | 19..849 | 4155 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:11:24 has no hits.
MXO02455.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:28:27 Download gff for
MXO02455.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32253-PA | 238..1071 | 15..849 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:52 Download gff for
MXO02455.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11583-PA | 238..1071 | 15..849 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:58:26 Download gff for
MXO02455.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11583-RA | 326..1159 | 15..849 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:39 Download gff for
MXO02455.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11583-RA | 326..1159 | 15..849 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:39 Download gff for
MXO02455.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4281597..4282431 | 15..849 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:58:26 Download gff for
MXO02455.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4281597..4282431 | 15..849 | 99 | | Plus |