MXO02456.3prime Sequence
702 bp (702 high quality bases) assembled on 2006-12-21
> MXO02456.3prime
ATGGTCTAGAAAGCTTGCCTGGCTCTTCGCTTTGTTCTCGGCCATGCAGC
TCAGGATGCGGGTCTGCAGAGCCCGTGCACCCTTGAGGTTGATCTCCTCG
TTGTCGGGCAACAACTTATCCATGCGTTCCATCCATTGCTTAGTCTGCGG
GTACTTTTCCCGTTCCACTGGTATGAGCAGATCCAAGGTCACCAGAGTGG
TGTGGATGGACACGTCGGCAACGCTCAGTTCGTTGCCCACCACGAAACTT
CCTTGCTGCAGAAAGTGTTCCAAGTCGGAGTACGCATTGTGGCAGAGGGT
CAGCGATCGGGGGTTGTATTCTCCCTCGCCACCGTAAATGTTCCGAGCCA
CAATGTCCTTTACCACCTGAAATAGCACTCCGTTCTCGTAGTGCATGCGA
TGGTCGATGTGGGCTCTCCTTTTCAAATCCCGCGGATAGAGTTGGTCATT
CCCGGCGTACTTGGCTACCAGGAAGCACACGATGGCGTGACTGTCCACGT
AGACCTCGCCATCGCTGTCCACAAACACCGGGATCTGGTGCTGGGGGTTT
AGCTTGACAAATTCCTCGCTCAGGTGTTCCTTCTTGGCGAAGTCAACGGG
TTTGAGCTCCAGGTCCAGTCCAATAAGTTTGGCCACCAGGATGCATGCCC
TGGCAGGAGGACTAAAAAGGGCGTAGTACAGCGTTGGCTTCGACATGTCG
AC
MXO02456.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:23:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11784-PA | 681 | CG11784-RA | 1..678 | 696..19 | 3390 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE13-RB | 1061 | CG11784-RB | 230..907 | 696..19 | 3390 | 100 | Minus |
GstE13-RA | 862 | CG11784-RA | 31..708 | 696..19 | 3390 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9122620..9123155 | 554..19 | 2680 | 100 | Minus |
2R | 25286936 | 2R | 9122354..9122448 | 696..602 | 475 | 100 | Minus |
2R | 25286936 | 2R | 9122519..9122567 | 601..553 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:25:04 has no hits.
MXO02456.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:28:30 Download gff for
MXO02456.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11784-PA | 1..681 | 18..696 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:53 Download gff for
MXO02456.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11784-PA | 1..681 | 18..696 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:34 Download gff for
MXO02456.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE13-RA | 26..714 | 11..702 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:15 Download gff for
MXO02456.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE13-RA | 26..714 | 11..702 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:15 Download gff for
MXO02456.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9122349..9122448 | 602..702 | 97 | -> | Minus |
2R | 9122519..9122567 | 553..601 | 100 | -> | Minus |
2R | 9122622..9123161 | 11..552 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:34 Download gff for
MXO02456.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5009854..5009953 | 602..702 | 97 | -> | Minus |
arm_2R | 5010024..5010072 | 553..601 | 100 | -> | Minus |
arm_2R | 5010127..5010666 | 11..552 | 99 | | Minus |
MXO02456.5prime Sequence
702 bp (702 high quality bases) assembled on 2006-12-21
> MXO02456.5prime
CAGTCGACATGTCGAAGCCAACGCTGTACTACGCCCTTTTTAGTCCTCCT
GCCAGGGCATGCATCCTGGTGGCCAAACTTATTGGACTGGACCTGGAGCT
CAAACCCGTTGACTTCGCCAAGAAGGAACACCTGAGCGAGGAATTTGTCA
AGCTAAACCCCCAGCACCAGATCCCGGTGTTTGTGGACAGCGATGGCGAG
GTCTACGTGGACAGTCACGCCATCGTGTGCTTCCTGGTAGCCAAGTACGC
CGGGAATGACCAACTCTATCCGCGGGATTTGAAAAGGAGAGCCCACATCG
ACCATCGCATGCACTACGAGAACGGAGTGCTATTTCAGGTGGTAAAGGAC
ATTGTGGCTCGGAACATTTACGGTGGCGAGGGAGAATACAACCCCCGATC
GCTGACCCTCTGCCACAATGCGTACTCCGACTTGGAACACTTTCTGCAGC
AAGGAAGTTTCGTGGTGGGCAACGAACTGAGCGTTGCCGACGTGTCCATC
CACACCACTCTGGTGACCTTGGATCTGCTCATACCAGTGGAACGGGAAAA
GTACCCGCAGACTAAGCAATGGATGGAACGCATGGATAAGTTGTTGCCCG
ACAACGAGGAGATCAACCTCAAGGGTGCACGGGCTCTGCAGACCCGCATC
CTGAGCTGCATGGCCGAGAACAAAGCGAAGAGCCAGGCAAGCTTTCTAGA
CC
MXO02456.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:23:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11784-PA | 681 | CG11784-RA | 1..678 | 9..686 | 3390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE13-RB | 1061 | CG11784-RB | 230..907 | 9..686 | 3390 | 100 | Plus |
GstE13-RA | 862 | CG11784-RA | 31..708 | 9..686 | 3390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9122620..9123155 | 151..686 | 2680 | 100 | Plus |
2R | 25286936 | 2R | 9122354..9122448 | 9..103 | 475 | 100 | Plus |
2R | 25286936 | 2R | 9122519..9122567 | 104..152 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:10:06 has no hits.
MXO02456.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:28:32 Download gff for
MXO02456.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11784-PA | 1..681 | 9..687 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:54 Download gff for
MXO02456.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11784-PA | 1..681 | 9..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:28 Download gff for
MXO02456.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE13-RA | 24..714 | 1..694 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:56 Download gff for
MXO02456.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE13-RA | 24..714 | 1..694 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:56 Download gff for
MXO02456.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9122347..9122448 | 1..103 | 96 | -> | Plus |
2R | 9122519..9122567 | 104..152 | 100 | -> | Plus |
2R | 9122622..9123161 | 153..694 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:28 Download gff for
MXO02456.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5009852..5009953 | 1..103 | 96 | -> | Plus |
arm_2R | 5010024..5010072 | 104..152 | 100 | -> | Plus |
arm_2R | 5010127..5010666 | 153..694 | 99 | | Plus |