MXO02460.3prime Sequence
780 bp (735 high quality bases) assembled on 2006-12-21
> MXO02460.3prime
ATGGTCTAGAAAGCTTGCAACCTTTAAACGAGCGAGCAATCCCTGGCAGC
GATCTTCTAATTGGAGGGGACTACACTGGATAGTCGGATCCTCTGTTAGA
GTCCGGGTGATCTTCCATAAGCACTCGAGATCGTATTGCACATGATAATC
GTTCATTGTGTAACTATCGAATAGTAAAAATTTGGTGGCTACGGTTCCCT
CTGCCAATCGGCGAGCGGCTATAAACTCCAGTAGTTCTATAAAATCGAGG
TAGTTGATACCAAAGCTGGCCCTCAGCATTGTCTGGCAGTGGGCCTCAAA
GTTGTCCATCTGCTGGCAGTCGGAGATCTCATTGCAAACGGCCTTCAGGT
TGTTCTTAAGGTTTTGCCAGACCATGGATATGTTGCAGCCATTGAACCAG
TTGTGATTGACGGATATGGTGTCTGTTAGGTTCCACACCTGATGAAACCA
GCCACTGGGCACGAAAACAGCTTCATTGGCCCGCTGATTAATGGTGTAAT
ATCGCACGTTGTGCTCATCCAGCATTTTCTCGTCTATACTAAAGGGCAGG
TTTCCCAAGCGATCGTTGAGTTTGAGTTCTTCTCCCGGCGGCATTATCAG
CCATTTCTTAAGGCCCACTATATTGGTGGACCAACTGAAGGAGCCAAACA
CGTCCGCATGATAGGAGGTCCATGAGTTCTTGGGCCCCATATAGACGAAT
CGATAGTCGTCTTTTCCCTGCTGAATCAGTTGTTCGTTGAGCCAGTCGGA
GGCAAAGTATTTAGGCACCTTGTAGAAATT
MXO02460.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7200-PA | 1278 | CG7200-RA | 517..1269 | 777..25 | 3740 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7200-RB | 2041 | CG7200-RB | 1181..1933 | 777..25 | 3750 | 99.9 | Minus |
| CG7200-RA | 1517 | CG7200-RA | 657..1409 | 777..25 | 3750 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18157218..18157864 | 25..671 | 3235 | 100 | Plus |
| 2L | 23513712 | 2L | 18157917..18158024 | 670..777 | 525 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:25:28 has no hits.
MXO02460.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:28:43 Download gff for
MXO02460.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7200-PA | 514..1278 | 18..780 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:20:57 Download gff for
MXO02460.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7200-PA | 514..1278 | 18..780 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:22:51 Download gff for
MXO02460.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7200-RA | 654..1414 | 19..780 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:11:29 Download gff for
MXO02460.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7200-RA | 654..1414 | 19..780 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:11:29 Download gff for
MXO02460.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18157212..18157863 | 19..670 | 99 | <- | Plus |
| 2L | 18157918..18158027 | 671..780 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:22:51 Download gff for
MXO02460.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18157212..18157863 | 19..670 | 99 | <- | Plus |
| arm_2L | 18157918..18158027 | 671..780 | 98 | | Plus |
