Clone Sequence Records
MXO02463.3prime Sequence
781 bp (774 high quality bases) assembled on 2006-12-21
> MXO02463.3prime
ATGGTCTAGAAAGCTTGCCCAGCCGAATATCAGGTCCATGGCCTTGTCCA
TCAGACCGGAGCTCTTTTGCGGCACATCCTTCTGCGGCGATATGATGTTA
TCTTTGCGGGCCAGCTTGTACGACTGCTGGGAAAACGGTCGAATCGCACT
GGGGCTGGTGGGGGGATCTCCTATCTCTGCATTGGGCACAGAGCCGATGT
TCTCCTTATCGATCACCGACCTATCCGTGCAGCGCGACACGCCCACCATC
ACATTGCCGGCGATGATTTTTTCGTTGTAGTTCAGCGCCTTGTCGCTCTC
GATGCGCGAGGAGTAGCGCACATACATCCAGTTGCCGTTCTGCGGGGCAT
GCACCACGTCCACAATGGTGCCGCAGACGGTGAAGTGCTGCAGCACCATG
GAGCCGGCCCCCGGCGGGAACCCGAAGATGGTAACCCAAAAGTCGGATAG
GCGCGAGTTGCCGCCCGTCGTCACGGATGTGCCCAGGCCTCCAGCTGGCG
AGGCAGTGGCTCCAAGTGGCGAGCACAGTGCTCGCATCGAGGCATTGATG
GCATTGGGCGCCCCGGGTGCGAACGAGTCATTCGTGTGATAGCTGCTCTG
GTAGCTCTGGTTCGGTGACTGCAACTGCAGCATGCCAAGATGGTTCTTCT
TCTTCGGGGTGACGGACTGTTCGCGCAGCGAGTCGAAGAGTCCCTGGGTG
GGCGGTCCCGTCTGGTGGTGGCTGTGCGTCTGGCCGTGCGCGGTCGTTGA
GCTGTTGGCGCCCACAGCCGTGTGGGCGCCT
MXO02463.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6540-PA | 996 | CG6540-RA | 231..993 | 781..19 | 3815 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6540-RA | 1249 | CG6540-RA | 355..1117 | 781..19 | 3815 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18648595..18649357 | 781..19 | 3815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:05:19 has no hits.
MXO02463.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:28:51 Download gff for
MXO02463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6540-PA | 231..996 | 15..781 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:00 Download gff for
MXO02463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6540-PA | 231..996 | 15..781 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:29 Download gff for
MXO02463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6540-RA | 355..1121 | 14..781 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:58 Download gff for
MXO02463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6540-RA | 355..1121 | 14..781 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:58 Download gff for
MXO02463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18648595..18649361 | 14..781 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:29 Download gff for
MXO02463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18542628..18543394 | 14..781 | 99 | | Minus |
MXO02463.5prime Sequence
789 bp (734 high quality bases) assembled on 2006-12-21
> MXO02463.5prime
CAGTCGACATGGAGCCAATGAATCTGGGCAGCCCGGTCAACAGTCCTGGC
TCCAACCAGACCCAGTATCTGCCACCTTTTCTGCTCGGCGATCCGCAAGG
TATAACGCCGCACAAGAACACGCTGTCCCCGAAAACCGGGCGCTCTAATA
TAAGTTTCGCCACCTCGCCCGGCGGCAGCAGTCCGCACGAGCTCAACCGC
TCCGCTCTGAGCACACGCACTCTGTTCGCCGCCCAAGGAGGCGCCCACAC
GGCTGTGGGCGCCAACAGCTCAACGACCGCGCACGGCCAGACGCACAGCC
ACCACCAGACGGGACCGCCCACCCAGGGACTCTTCGACTCGCTGCGCGAA
CAGTCCGTCACCCCGAAGAAGAAGAACCATCTTGGCATGCTGCAGTTGCA
GTCACCGAACCAGAGCTACCAGAGCAGCTATCACACGAATGACTCGTTCG
CACCCGGGGCGCCCAATGCCATCAATGCCTCGATGCGAGCACTGTGCTCG
CCACTTGGAGCCACTGCCTCGCCAGCTGGAGGCCTGGGCACATCCGTGAC
GACGGGCGGCAACTCGCGCCTATCCGACTTTTGGGTTACCATCTTCGGGT
TCCCGCCGGGGGCCGGCTCCATGGTGCTGCAGCACTTCACCGTCTGCGGC
ACCATTGTGGACGTGGTGCATGCCCCGCAGAACGGCAACTGGATGTATGT
GCGCTACTCCTCGCGCATCGAGAGCGACAAGGCGCTGACCTACAACGAAA
AATCATCGCCGGCAATGTGATGGTGGGCGTGTCGCGCTG
MXO02463.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6540-PA | 996 | CG6540-RA | 1..744 | 9..752 | 3695 | 99.8 | Plus |
CG6540-PA | 996 | CG6540-RA | 741..782 | 748..789 | 210 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6540-RA | 1249 | CG6540-RA | 120..906 | 4..789 | 3880 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18648515..18649146 | 159..789 | 3095 | 99.7 | Plus |
X | 23542271 | X | 18648301..18648456 | 4..159 | 765 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:58:09 has no hits.
MXO02463.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:28:52 Download gff for
MXO02463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6540-PA | 1..782 | 9..789 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:00 Download gff for
MXO02463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6540-PA | 1..782 | 9..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:07 Download gff for
MXO02463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6540-RA | 117..906 | 1..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:58 Download gff for
MXO02463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6540-RA | 117..906 | 1..789 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:58 Download gff for
MXO02463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18648298..18648456 | 1..159 | 98 | -> | Plus |
X | 18648516..18649146 | 160..789 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:07 Download gff for
MXO02463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18542331..18542489 | 1..159 | 98 | -> | Plus |
arm_X | 18542549..18543179 | 160..789 | 99 | | Plus |