Clone MXO02464 Report

Search the DGRC for MXO02464

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:24
Well:64
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptSet-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02464.3prime Sequence

831 bp (793 high quality bases) assembled on 2006-12-21

> MXO02464.3prime
ATGGTCTAGAAAGCTTGCCTTGTCATCCTCATCCTCTTCCTCTTCCTCGC
CTTCTCCATCCTCACCGTCCTCGTCGTCAAATGCCTCCTCATCATTATCT
TCGTTGTCCTCCTCGTCCTCGGGCTCCACCTCGATATCAGGTACCAGATA
ATACTGCAGTGGATTTGGCCAAAGGTCGTCTTTTATCAGTTCTGCGATCT
CGTCGTTGACGGGATCGGTGTTATCCGAGAACCAATCGAAGAAGGTTTTG
TATTCGGAGTTGCGCTTCTTCTTGTTTCCGTACGGCTTTGTCAGCAAAAG
TTTTAGCAGGTTCTTTCCCTCCTTCCATTTGATGGGCGTGCTGGTAGACG
CGGGCCAGTCTCCGTTCTCGGAAGCAGCCGCTGAATTCAGGTGGAACTCT
TTGGTGAGCACCTTGTTTTCGAAGTAAGGATTCTCGTCGAAATGGAAGTT
GATGCGGTAACCCGATTTGATGTCCTCAAACTCCTCAACCTCAAGTTTGT
TGAGCGCGTGCAGGCACTCCTCCTCCTCCTCGTCCAGAATGCCGGATACT
TGCGGGTGGTTGATAAACGAGGTCACCCAAAAGTTGGGGATGCGCTTGAC
CAGCTCGCTGCGCTTCTCGTAGCAGGGCTTCCGCAGCTTGTTGTACTTCT
GCTCCACCTTGAGGATCTCCTCGCTGGCCTTCTCGTTCAGCGCATCGATC
TCGTTCTGGCAGGCATCAATTTGCTCCAACGCCTCCGACTCCTCCTCGTT
GTTACCGGCGGCGGCGGATGTGTTGCCATCGGCGGGGGCGCCGTCCAGCT
TGGCTCGCTTTGGCACGCTCGACATGTCGAC

MXO02464.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG4299-PA 810 Set-RA 1..807 825..19 4035 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:54
Subject Length Description Subject Range Query Range Score Percent Strand
Set-RA 1169 CG4299-RA 136..942 825..19 4035 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15264604..15264955 378..27 1760 100 Minus
3R 32079331 3R 15263687..15263944 825..568 1290 100 Minus
3R 32079331 3R 15264352..15264542 568..378 955 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:02:52 has no hits.

MXO02464.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:28:54 Download gff for MXO02464.3prime
Subject Subject Range Query Range Percent Splice Strand
Set-PA 1..810 15..825 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:00 Download gff for MXO02464.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4299-PA 1..810 15..825 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:45 Download gff for MXO02464.3prime
Subject Subject Range Query Range Percent Splice Strand
Set-RA 129..948 12..831 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:46 Download gff for MXO02464.3prime
Subject Subject Range Query Range Percent Splice Strand
Set-RA 129..948 12..831 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:46 Download gff for MXO02464.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 15263680..15263944 568..831 98 -> Minus
3R 15264353..15264542 378..567 100 -> Minus
3R 15264605..15264955 27..377 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:45 Download gff for MXO02464.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11089402..11089666 568..831 98 -> Minus
arm_3R 11090075..11090264 378..567 100 -> Minus
arm_3R 11090327..11090677 27..377 100   Minus

MXO02464.5prime Sequence

815 bp (546 high quality bases) assembled on 2006-12-21

> MXO02464.5prime
CAGTCGACATGTCGAGCGTGCCAAAGCGAGCCAAGCTGGACGGCGCCCCC
GCCGATGGCAACACATCCGCCGCCGCCGGTAACAACGAGGAGGAGTCGGA
GGCGTTGGAGCAAATTGATGCCTGCCAGAACGAGATCGATGCGCTGAACG
AGAAGGCCAGCGAGGAGATCCTCAAGGTGGAGCAGAATACAACAAGCTGC
GGAAGCCCTGCTACGAGAAGCGCAGCGAGCTGGTCAAGCGCATCCCCAAC
TTTTGGGTGACCTCGTTTATCAACCACCCGCAAGTATCCGGCATTCTGGA
CGAGGAGGAGGAGGAGTGCCTGCACGCGCTCAACAAACTTGAGGTTGAGG
AGTTTGAGGACATCAAATCGGGTTACCGCATCAACTTCCATTTCGACAAG
AATCCTTACTTCGAAAACAAGGTGCTCACCAAAGAGTTCCACCTGAATTC
AGCGGCTGCTTCCGAGAACGGAGACTGGCCCGCGTCTACCAGCACGCCCA
TCAAATGGAAGGAGGGAAAGAACCTGCTAAAACTTTTGCTGACAAAGCCG
TACGGAAACAAGAAGAAGCGCAACTCCGAATACAAAACCTTCTTCGATTG
GTTCTCGGATAACACCGATCCCGTCAACGACGAGATCGCAGAACTGATAA
AAGACGACCTTTGGCCAAATCCACTGCAGTATTATCTGGTACCTGATATC
GAGGTGGAGCCCGAGGACGAGGAGGACAACGAAGATAATGATGAGGAGGC
ATTTGACGACGAGGACGGTGAGGATGGAGAACGCGAGGAAGATGAAGAGG
ATGAGGATGACACGG

MXO02464.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:24:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG4299-PA 810 Set-RA 181..805 188..812 3050 99.5 Plus
CG4299-PA 810 Set-RA 1..179 9..187 895 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:58:07
Subject Length Description Subject Range Query Range Score Percent Strand
Set-RA 1169 CG4299-RA 136..940 9..812 3955 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:58:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15264604..15264955 455..806 1730 99.4 Plus
3R 32079331 3R 15263687..15263944 9..265 1240 99.6 Plus
3R 32079331 3R 15264352..15264542 265..455 940 99.5 Plus
Blast to na_te.dros performed on 2014-11-28 21:58:06 has no hits.

MXO02464.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:28:55 Download gff for MXO02464.5prime
Subject Subject Range Query Range Percent Splice Strand
Set-PA 1..807 9..815 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:21:01 Download gff for MXO02464.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4299-PA 1..807 9..815 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:05 Download gff for MXO02464.5prime
Subject Subject Range Query Range Percent Splice Strand
Set-RA 128..942 1..815 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:55 Download gff for MXO02464.5prime
Subject Subject Range Query Range Percent Splice Strand
Set-RA 128..942 1..815 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:55 Download gff for MXO02464.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 15263679..15263944 1..265 98 -> Plus
3R 15264353..15264542 266..455 99 -> Plus
3R 15264605..15264955 456..806 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:05 Download gff for MXO02464.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11089401..11089666 1..265 98 -> Plus
arm_3R 11090075..11090264 266..455 99 -> Plus
arm_3R 11090327..11090677 456..806 99   Plus